CX070121

Overview
NameCX070121
Unique NameCX070121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:525..1310. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_DINSH (Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoroseobacter shibae (strain DFL 12) GN=pckA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.039e-59
Identity = 107/206 (51.94%), Postives = 136/206 (66.02%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+T N R AYP+ YI NA    +G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P  V GV + +LDP  TW D  AY     KL  +F  NF  +  Y
Sbjct:  316 DDSLTANMRCAYPLNYISNASETALGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGSRMPIKATRALLTAALDGSLADATFRKDANFGFDVPVTVHGVDATLLDPRGTWEDSAAYDAQAQKLVEMFAENFAQYVPY 521          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.663e-59
Identity = 107/201 (53.23%), Postives = 135/201 (67.16%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 603
            D S+T N R AYP+ YI NA     G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P +V GVP  +LDP  TW D +AY     KL  +F  NFE
Sbjct:  316 DDSLTANMRCAYPLHYISNASQAARGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIATHGATCWLVNTGWTGGAYGTGSRMPIKATRGLLTAALDGSLADAEFRKDPNFGFQVPVDVTGVPGILLDPRRTWDDAEAYDRQAAKLVKMFSDNFE 516          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.663e-59
Identity = 114/209 (54.55%), Postives = 144/209 (68.90%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 627
            D S TENTR +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSY  G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY  T  KLA +F +NF+ + + K G
Sbjct:  306 DASKTENTRVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEG 514          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_AMOA5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebophilus asiaticus (strain 5a2) GN=pckA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.663e-59
Identity = 106/203 (52.22%), Postives = 139/203 (68.47%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S+TEN R AYP+EYIP A IP +G  PK++  L+CDA+GVLPP+S+L+  Q +++F+SGYTA +AGTE GI  P A FSACFGA F+ LHPT+YA MLA+K++K+  T WLVNTGW GG YG G RI L YTR ++ A  SG L  A ++K  +F + IP     VP+ IL+P NTW   + Y+    KL   F  NF ++
Sbjct:  316 DSSITENVRCAYPLEYIPGALIPSIGSIPKHIFFLSCDAYGVLPPISQLDKDQAIHYFLSGYTAKIAGTEAGISAPKAVFSACFGAPFLPLHPTRYATMLADKLEKYEVTVWLVNTGWIGGGYGIGKRIDLNYTRAMVTAALSGELAKAGFEKDAIFNLSIPNACPEVPTHILNPSNTWNSVKEYELEAHKLMEAFASNFALY 518          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 3.478e-59
Identity = 111/225 (49.33%), Postives = 147/225 (65.33%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 675
            D S+T NTR  YPI+YIPNA++  VG  PK VI L  D+FGVLPP+S+L+    MYHF++G+TA +AGTE G+KEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+NTGWSGG+YG G RI L YTR ++ A+ +G   NA YK  D+F ++IP    GVPSEI++P +TW D+  Y     KLA LF  NF+        K   + E I  AGP +
Sbjct:  306 DASITPNTRVGYPIDYIPNAELSGVGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYGTGKRINLKYTRAMVTAVLNGYFDNAEYKHDDIFNLDIPQSCPGVPSEIMNPIDTWQDRDKYIIAAKKLANLFYNNFK-------EKYPNMPENITNAGPKY 523          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.478e-59
Identity = 109/206 (52.91%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+TENTR AYP+++IPNA     G  PKN+I+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL NA ++    FG  +P EV GV S ILDP +TWADK AY     KL  +F  NFE F ++
Sbjct:  314 DGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVESSILDPRSTWADKVAYDAQAKKLVDMFVSNFEKFESH 519          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_MARMM (Phosphoenolpyruvate carboxykinase [ATP] OS=Maricaulis maris (strain MCS10) GN=pckA PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.932e-59
Identity = 106/203 (52.22%), Postives = 142/203 (69.95%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 609
            D S+ EN+R AYP+  IPNA       HPKNVI+L CDAFG++PP++KL  AQ MYHF+SGYTA VAGTE G+ EP+ATFS CFGA F+  HP +Y A+L E + +H    WLVNTGW+GG+YG G+R+ +  TR +++A   GSL +A +++   FG  +P  V+GV + ILDP +TW+DK AY +   KLA +F  NF+ F
Sbjct:  313 DDSLAENSRGAYPLSAIPNASETGRCGHPKNVIMLTCDAFGIMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPSATFSTCFGAPFMPRHPAEYGALLRELIAEHQVDCWLVNTGWTGGAYGTGNRMPIKATRALLNAAMDGSLNSAAFREDPNFGFMVPIAVDGVDASILDPRSTWSDKAAYDDRAAKLATMFIENFKTF 515          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain HaA2) GN=pckA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.747e-59
Identity = 111/224 (49.55%), Postives = 145/224 (64.73%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 672
            D S TENTR+AYP+E IPNA +      PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP   FS CFG+ F+   P+ Y  ML E + KH    WLVNTGW+GG YG G R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPS+ILDP  TWADK A+  T  KL G+F++NF  F       + ++  ++ AA P+
Sbjct:  315 DGSKTENTRSAYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPEPEFSTCFGSPFLPRDPSVYGNMLRELIAKHDVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDGSLRNVEFRTDPYFGFAVPTSLHGVPSDILDPVKTWADKAAFDATARKLVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_BRUC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=pckA PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.747e-59
Identity = 108/206 (52.43%), Postives = 140/206 (67.96%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+TENTR AYP+++IPNA     G  PKN+I+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL NA ++    FG  +P EV GV + ILDP +TWADK AY     KL  +F  NFE F ++
Sbjct:  314 DGSLTENTRCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVENSILDPRSTWADKVAYDAQAKKLVDMFVSNFEKFESH 519          
BLAST of CX070121 vs. ExPASy Swiss-Prot
Match: PCKA_SILST (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter sp. (strain TM1040) GN=pckA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.012e-58
Identity = 107/206 (51.94%), Postives = 134/206 (65.05%), Query Frame = 1
Query:    1 DKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 618
            D S+T N R AYP+ YI NA     G HPKN+I+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL NA ++K   FG ++P    GV   +LDP  TW DK AY     KL  +F  NFE +  Y
Sbjct:  316 DDSLTANMRCAYPLHYISNASASARGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIAAHGATCWLVNTGWTGGAYGTGSRMPIKATRALLTAALDGSLANAEFRKDPNFGFDVPVAAPGVAEVLLDPRRTWDDKAAYDAQAEKLVQMFSDNFEQYLPY 521          
The following BLAST results are available for this feature:
BLAST of CX070121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_DINSH2.039e-5951.94Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoros... [more]
PCKA_ROSDO2.663e-5953.23Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]
PCKA_CAMJR2.663e-5954.55Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_AMOA52.663e-5952.22Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebop... [more]
PCKA_FUSNN3.478e-5949.33Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_BRUSU3.478e-5952.91Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_MARMM5.932e-5952.22Phosphoenolpyruvate carboxykinase [ATP] OS=Maricau... [more]
PCKA_RHOP27.747e-5949.55Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_BRUC27.747e-5952.43Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_SILST1.012e-5851.94Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070121 ID=CX070121; Name=CX070121; organism=Citrus sinensis; type=EST; length=786bp
GACAAATCTGTCACAGAGAACACTCGTGCTGCCTACCCCATTGAGTATAT
CCCCAATGCAAAGATACCATGCGTTGGTCCTCATCCCAAGAATGTCATCC
TTTTGGCATGTGATGCTTTTGGTGTACTCCCACCAGTGAGCAAGCTGAAC
CTGGCACAAACAATGTACCATTTCATCAGTGGCTACACTGCTTTGGTAGC
TGGAACAGAGGATGGTATTAAGGAGCCAACGGCAACATTTTCAGCTTGCT
TTGGTGCAGCATTTATCATGCTGCATCCTACCAAGTATGCAGCAATGCTG
GCTGAGAAGATGCAGAAGCATGGTGCTACAGGATGGCTCGTCAACACTGG
ATGGTCAGGTGGAAGCTATGGTTGTGGCAGCCGCATCAAGTTACCGTACA
CTCGAAAAATCATTGATGCGATACACTCTGGCAGCCTGTTGAATGCAAAT
TACAAGAAAACTGATGTATTTGGGGTGGAAATCCCCACTGAAGTCGAGGG
AGTGCCTTCAGAAATCCTGGATCCAGAGAACACTTGGGCAGACAAGCAGG
CTTACAAGGAGACACTGCTGAAGCTGGCTGGTCTTTTCAAGAGGAACTTT
GAAATATTCACAAACTACAAGATTGGCAAGGACAACAAGCTCACTGAAGA
GATCCTTGCAGCTGGTCCAAATTTCTAATTTAGACCGAGTGAAGAACAAG
CAAAGAACGTGAGTGTGGTTTGGGAAATATGATGGAAATAAAGCGTAATA
TAGTCATATTCGACATGTGTGGTTCGATTCATATGT
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