CX070120

Overview
NameCX070120
Unique NameCX070120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:548..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.880e-59
Identity = 110/215 (51.16%), Postives = 143/215 (66.51%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            RAAYP+++IPNA IP +G HP+ V+ L  DAFGV+PP++KL   Q MYHF+SGYT+ +AGTE GI +P ATFS CFGA F+   P  YA +L E++ KHGA+ +LVNTGW+GG  G G R+ LPYTR ++ A   G L    +    VFG+ +PT   GVP+E+L+P +TW DK+ Y     KLAGLF  NF  F +        + EEI AAGP
Sbjct:  317 RAAYPVDFIPNAVIPGIGGHPRTVVFLTADAFGVMPPIAKLTREQAMYHFLSGYTSKLAGTERGITDPQATFSTCFGAPFLPRSPRVYADLLGERIAKHGASVYLVNTGWTGGPSGIGRRMSLPYTRAMVRAAIKGELEGVEFVPDPVFGILVPTSCPGVPAEVLNPRHTWQDKEKYDAMARKLAGLFAENFTKFRD--------VPEEIRAAGP 523          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.094e-58
Identity = 108/197 (54.82%), Postives = 133/197 (67.51%), Query Frame = -2
Query:  232 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 822
            R AYPI+YI N   P V  HPK +I L  DAFGVLPP+SKL   Q MYHF+SG+T+ +AGTE G+ EP   FS CFG+ F+ L  T YA ML +K+ +HGA  +LVNTGW+GG YG GSR+KL YTR ++ A   G L N    +  VFG+ IPT VEGVPS++L+P   WADK AY     +LAGLF  NF+ F N
Sbjct:  319 RVAYPIQYIENIVDPSVAGHPKTIIFLTADAFGVLPPISKLTKEQAMYHFLSGFTSKLAGTERGVTEPEPVFSTCFGSPFLPLPATVYAEMLGQKIDEHGAQVYLVNTGWTGGEYGTGSRMKLSYTRTMVRAAIDGKLTNVETTQDAVFGLHIPTAVEGVPSQVLNPREAWADKAAYDAKAAELAGLFNENFKKFAN 515          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_PELPD (Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobacter propionicus (strain DSM 2379) GN=pckA PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.429e-58
Identity = 101/198 (51.01%), Postives = 137/198 (69.19%), Query Frame = -2
Query:  229 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 822
            RA+YP+ +IPN     +  HP N+I+L CDA+GVLPP+S L   Q MYHF+SGYTA VAGTE G+KEPTATFS CFG  F+ L+PT Y  +L EK+ +H  + WLVNTGW+GG YG G RI++ Y+R +I+A   G+L + +++    FG+ IPT   GVPSE+L+P NTW+D   Y +T  +L  +F+ NF  +  Y
Sbjct:  324 RASYPLTHIPNIVPSGIAGHPANIIMLTCDAYGVLPPISHLTKEQAMYHFLSGYTARVAGTEAGVKEPTATFSTCFGGPFMALNPTVYGELLREKISRHNVSCWLVNTGWNGGPYGVGERIRISYSRALINAALDGTLADGSFETDPFFGLAIPTSCPGVPSEMLNPRNTWSDPARYDDTASRLVAMFRSNFTKYQPY 521          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.432e-58
Identity = 110/201 (54.73%), Postives = 140/201 (69.65%), Query Frame = -2
Query:  220 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 822
            R +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  314 RVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYAETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.432e-58
Identity = 110/201 (54.73%), Postives = 140/201 (69.65%), Query Frame = -2
Query:  220 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 822
            R +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  314 RVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.094e-58
Identity = 102/198 (51.52%), Postives = 136/198 (68.69%), Query Frame = -2
Query:  229 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 822
            R AYP+EYI NA +  +G HPKN+I+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L +K+ +HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A  +GSL NA ++K   FG ++P  V GV   +LDP  TW D+ A+ +   KL  +F  NFE +  Y
Sbjct:  324 RCAYPLEYISNASVSALGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIARHGATCWLVNTGWTGGAYGVGSRMPIKATRALLTAALNGSLNNAEFRKDGNFGFDVPVSVPGVAEVLLDPRRTWDDQGAFDKQAAKLVQMFADNFEQYVPY 521          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.265e-58
Identity = 107/195 (54.87%), Postives = 133/195 (68.21%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L  A   K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  319 RAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKAETAKHDIFGLEVPRHVPGVPDEVLMPEQTWADKDAYKVKAIELANEFKENFKKF 513          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.210e-57
Identity = 112/215 (52.09%), Postives = 140/215 (65.12%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            RAAYPI++IP A    +G HPK +I L  DAFGVLPP++KL   Q MY+F+SGYT+ +AGTE GI EP ATFS CFGA F+ L P  YA ML EK++K+    +LVNTGWSGG YG G RI L YTRK++ A   G L    + K  +F + IP    GVPSEIL+P NTW DK+ Y +T  +LA  F  NF+        K  +++EEI  AGP
Sbjct:  313 RAAYPIDFIPGAVQSGIGGHPKTIIFLTADAFGVLPPIAKLTKEQAMYYFLSGYTSKLAGTERGITEPQATFSTCFGAPFLPLPPMVYAKMLGEKIEKYDTKVFLVNTGWSGGPYGIGKRINLEYTRKMVSAALKGELDKVEFTKDPIFNLNIPASCPGVPSEILNPRNTWKDKEEYDKTAKRLAQRFIENFQ--------KYKEVSEEIKNAGP 519          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=pckA PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.210e-57
Identity = 105/198 (53.03%), Postives = 132/198 (66.67%), Query Frame = -2
Query:  229 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 822
            R AYP+EYI NA    +G HPKNVI+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+   GAT WLVNTGW+GG+YG G R+ +  TR ++ A   GSL N  ++K   FG E+PTE+ GV S +LDP +TWAD  AY     KL  +F  NF  +  Y
Sbjct:  324 RCAYPLEYISNASATGMGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKITSLGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLANVTFRKDPNFGFEVPTELHGVDSSLLDPRSTWADPAAYDAQAKKLVEMFANNFAQYVPY 521          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.580e-57
Identity = 104/195 (53.33%), Postives = 138/195 (70.77%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RA+YPI +IPN      G HP +VI+L CDAFGVLPP+++L  AQ MYHF+SGYTA VAGTE G+ EP ATFSACFGA F+ L P+ YA +L +K+  H  + WLVNTGWSGG  G G R+K+ Y+R +++A   G+L   ++ K  VFG++IP+   G+P++IL+P N W+DK AY  T  KL  +F+ NFE F
Sbjct:  323 RASYPITHIPNIVGEGCGGHPNHVIMLTCDAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTEAGVTEPQATFSACFGAPFMALRPSLYADLLGKKIASHKVSCWLVNTGWSGGGPGIGGRMKIAYSRALVNAALDGTLGAGSFVKDSVFGLDIPSACPGLPADILNPRNVWSDKSAYDATAHKLVEMFRHNFEQF 517          
The following BLAST results are available for this feature:
BLAST of CX070120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA2_MOOTA2.880e-5951.16Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_LYSSC1.094e-5854.82Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_PELPD1.429e-5851.01Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobac... [more]
PCKA_CAMJJ5.432e-5854.73Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ85.432e-5854.73Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_SILPO7.094e-5851.52Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_BACWK9.265e-5854.87Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_THETN1.210e-5752.09Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]
PCKA_RHOS51.210e-5753.03Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_GEOSM1.580e-5753.33Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070120 ID=CX070120; Name=CX070120; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGA
GAACAAGTTTACATATGAATCGAACCACACATGTCGAATATGACTATATT
ACGCTTTATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTG
TTCTTCACTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTT
CAGTGAGCTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAG
TTCCTCTTGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTG
CTTGTCTGCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCT
CGACTTCAGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTT
GCATTCAACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTA
CGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAG
TGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGC
ATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCA
AGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTA
CCAAAGCAGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTC
AGCTTGCTCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGAT
GACATTCTTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATAT
ACTCAATGGGGTAGGCAGCACGA
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