CX070120

Overview
NameCX070120
Unique NameCX070120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.064e-57
Identity = 109/201 (54.23%), Postives = 141/201 (70.15%), Query Frame = -2
Query:  220 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 822
            R +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++K+    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW+DK AY ET  KLA +F +NF+ + + K G
Sbjct:  314 RVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNPINTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.696e-57
Identity = 105/195 (53.85%), Postives = 135/195 (69.23%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            R+AYPI  I N      G HPKN++ L  DAFGVLPP+S+L   QTMY FISG+TA + GTE G+ EP  TFS CFGA F+  HP +YA +LA+K+++ GA  WLVNTGW+GG YG G R+ + +TR +I+A  SG L N  +++   FG+EIPTEV GVP E+L+P   WADK AY  T  KLA +F+ NF+ F
Sbjct:  317 RSAYPITQIDNIVPEGRGGHPKNIVFLTADAFGVLPPLSRLTPEQTMYQFISGFTAKIPGTEQGVTEPQPTFSTCFGAPFMPRHPGEYARLLAQKVRESGANVWLVNTGWTGGQYGEGQRMSIQHTRTLINAALSGQLDNVKFEREPFFGLEIPTEVPGVPKEVLNPREAWADKAAYDRTARKLARMFRENFKRF 511          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BRASB (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.696e-57
Identity = 108/217 (49.77%), Postives = 144/217 (66.36%), Query Frame = -2
Query:  175 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 822
            R+AYP++YIPNA      PHPKNV++LA DAFGVLPP++KL+ AQ MYHF+SGYTA VAGTE G+  EP   FS CFG+ F+ L P+ Y  ML + + +H    WLVNTGW+GG YG GSR+ +  TR ++ A   GSL N  ++    FG  +PT + GVPSEILDP NTWADK  + +T   L G+F++NF  F       + ++  ++ AA P+
Sbjct:  322 RSAYPLDYIPNASRTGRAPHPKNVVMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPLDPSVYGNMLRQLIAEHNVDCWLVNTGWTGGKYGTGSRMPIKVTRALLTAALDGSLRNVEFRTDKYFGFAVPTALPGVPSEILDPVNTWADKAEFDKTARALVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BACC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain G9842) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.696e-57
Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  319 RAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKENFKKF 513          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_FLAJ1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 111/215 (51.63%), Postives = 136/215 (63.26%), Query Frame = -2
Query:  178 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 822
            R +YPI +I N +   +G +PKN+  L  D+FG+LPP+SKL   Q  YHFISGYTA VAGTE G+ EP   FSACFGA F+ LHPTKYA ML++KM+      WL+NTGW+GG+YG GSR+KL YTR +I A  +G L N  Y    VFG+  P     VPSEIL+P NTW DK  Y +  L+LA  FK NF  F  +          EILA  P
Sbjct:  324 RVSYPITHIDNIQPGSIGHNPKNIFFLTADSFGILPPISKLTPGQAAYHFISGYTAKVAGTEAGVTEPQPNFSACFGAPFMPLHPTKYAEMLSKKMKDADVKVWLINTGWTGGAYGTGSRMKLKYTRAMITAALNGELDNVEYVNHKVFGIAKPQSCPNVPSEILNPRNTWEDKDLYDKKALELAQKFKANFAKFEEF-------ANAEILAGAP 531          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_DINSH (Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoroseobacter shibae (strain DFL 12) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 103/198 (52.02%), Postives = 131/198 (66.16%), Query Frame = -2
Query:  229 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 822
            R AYP+ YI NA    +G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P  V GV + +LDP  TW D  AY     KL  +F  NF  +  Y
Sbjct:  324 RCAYPLNYISNASETALGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGSRMPIKATRALLTAALDGSLADATFRKDANFGFDVPVTVHGVDATLLDPRGTWEDSAAYDAQAQKLVEMFAENFAQYVPY 521          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BACHK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus thuringiensis subsp. konkukian GN=pckA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  319 RAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKANFKKF 513          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BACCQ (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain Q1) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  319 RAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKANFKKF 513          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BACC7 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain AH187) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.521e-57
Identity = 106/195 (54.36%), Postives = 132/195 (67.69%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  319 RAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKANFKKF 513          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.598e-57
Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = -2
Query:  244 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 822
            R AYP+ YI NA     G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P +V GVP  +LDP  TW D +AY     KL  +F  NFE
Sbjct:  324 RCAYPLHYISNASQAARGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIATHGATCWLVNTGWTGGAYGTGSRMPIKATRGLLTAALDGSLADAEFRKDPNFGFQVPVDVTGVPGILLDPRRTWDDAEAYDRQAAKLVKMFSDNFE 516          
The following BLAST results are available for this feature:
BLAST of CX070120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_CAMJD2.064e-5754.23Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_DEIGD2.696e-5753.85Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_BRASB2.696e-5749.77Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_BACC22.696e-5754.36Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_FLAJ13.521e-5751.63Phosphoenolpyruvate carboxykinase [ATP] OS=Flavoba... [more]
PCKA_DINSH3.521e-5752.02Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoros... [more]
PCKA_BACHK3.521e-5754.36Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACCQ3.521e-5754.36Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACC73.521e-5754.36Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_ROSDO4.598e-5753.37Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070120 ID=CX070120; Name=CX070120; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGA
GAACAAGTTTACATATGAATCGAACCACACATGTCGAATATGACTATATT
ACGCTTTATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTG
TTCTTCACTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTT
CAGTGAGCTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAG
TTCCTCTTGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTG
CTTGTCTGCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCT
CGACTTCAGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTT
GCATTCAACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTA
CGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAG
TGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGC
ATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCA
AGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTA
CCAAAGCAGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTC
AGCTTGCTCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGAT
GACATTCTTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATAT
ACTCAATGGGGTAGGCAGCACGA
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