CX070120

Overview
NameCX070120
Unique NameCX070120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3510 contig Csv1_Contig3510:548..1370. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.747e-56
Identity = 100/192 (52.08%), Postives = 132/192 (68.75%), Query Frame = -2
Query:  247 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNF 822
            R AYP++YI NA    +G HPKNVI+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG G R+ +  TR ++ A   GSL    +++   FG E+P ++ GV +++LDP +TWAD  AY +   KL  +F  NF
Sbjct:  324 RCAYPLDYISNASESGLGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLSGVQFRRDPNFGFEVPVDLHGVDAKLLDPRSTWADPAAYDQQAKKLVEMFANNF 515          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_MARMM (Phosphoenolpyruvate carboxykinase [ATP] OS=Maricaulis maris (strain MCS10) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.282e-56
Identity = 102/195 (52.31%), Postives = 136/195 (69.74%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            R AYP+  IPNA       HPKNVI+L CDAFG++PP++KL  AQ MYHF+SGYTA VAGTE G+ EP+ATFS CFGA F+  HP +Y A+L E + +H    WLVNTGW+GG+YG G+R+ +  TR +++A   GSL +A +++   FG  +P  V+GV + ILDP +TW+DK AY +   KLA +F  NF+ F
Sbjct:  321 RGAYPLSAIPNASETGRCGHPKNVIMLTCDAFGIMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPSATFSTCFGAPFMPRHPAEYGALLRELIAEHQVDCWLVNTGWTGGAYGTGNRMPIKATRALLNAAMDGSLNSAAFREDPNFGFMVPIAVDGVDASILDPRSTWSDKAAYDDRAAKLATMFIENFKTF 515          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BRASO (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain ORS278) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.282e-56
Identity = 107/217 (49.31%), Postives = 142/217 (65.44%), Query Frame = -2
Query:  175 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 822
            R+AYP++YIPNA      PHPKNV++LA DAFGVLPP++KL+ AQ MYHF+SGYTA VAGTE G+  EP   FS CFG+ F+ L P+ Y  ML + +  H    WLVNTGW+GG YG GSR+ +  TR ++ A   GSL N  ++    FG  +PT + GVPSEILDP NTW DK  + +T   L G+F++NF  F       + ++  ++ AA P+
Sbjct:  322 RSAYPLDYIPNASRTGRAPHPKNVVMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGSEPQPEFSTCFGSPFLPLDPSVYGNMLRQLIADHNVDCWLVNTGWTGGKYGTGSRMPIKVTRALLTAALDGSLRNVEFRTDKYFGFAVPTALPGVPSEILDPVNTWKDKVEFDKTARALVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 5.084e-56
Identity = 106/217 (48.85%), Postives = 141/217 (64.98%), Query Frame = -2
Query:  172 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 822
            R  YPI+YIPNA++  VG  PK VI L  D+FGVLPP+S+L+    MYHF++G+TA +AGTE G+KEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+NTGWSGG+YG G RI L YTR ++ A+ +G   NA YK  D+F ++IP    GVPSEI++P +TW D+  Y     KLA LF  NF+        K   + E I  AGP +
Sbjct:  314 RVGYPIDYIPNAELSGVGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYGTGKRINLKYTRAMVTAVLNGYFDNAEYKHDDIFNLDIPQSCPGVPSEIMNPIDTWQDRDKYIIAAKKLANLFYNNFK-------EKYPNMPENITNAGPKY 523          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.084e-56
Identity = 108/201 (53.73%), Postives = 138/201 (68.66%), Query Frame = -2
Query:  220 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 822
            R +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSY  G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY  T  KLA +F +NF+ + + K G
Sbjct:  314 RVSYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEG 514          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_AMOA5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebophilus asiaticus (strain 5a2) GN=pckA PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.640e-56
Identity = 101/195 (51.79%), Postives = 133/195 (68.21%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            R AYP+EYIP A IP +G  PK++  L+CDA+GVLPP+S+L+  Q +++F+SGYTA +AGTE GI  P A FSACFGA F+ LHPT+YA MLA+K++K+  T WLVNTGW GG YG G RI L YTR ++ A  SG L  A ++K  +F + IP     VP+ IL+P NTW   + Y+    KL   F  NF ++
Sbjct:  324 RCAYPLEYIPGALIPSIGSIPKHIFFLSCDAYGVLPPISQLDKDQAIHYFLSGYTAKIAGTEAGISAPKAVFSACFGAPFLPLHPTRYATMLADKLEKYEVTVWLVNTGWIGGGYGIGKRIDLNYTRAMVTAALSGELAKAGFEKDAIFNLSIPNACPEVPTHILNPSNTWNSVKEYELEAHKLMEAFASNFALY 518          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA1_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.640e-56
Identity = 101/200 (50.50%), Postives = 135/200 (67.50%), Query Frame = -2
Query:  223 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKI 822
            RAAYP+++IPNA IP VG HP+ V+ L  DAFGV+PP++KL   Q MY+F+SGYT+ +AGTE G+ EP ATFS CFGA F+   P  YA +L E++ +H A+ +LVNTGW+GG YG G R+ LPYTR ++ A  +G L    +    VFG  +P    GVP+EIL+P NTWA+ + Y     KLA LF+ NF  F +  +
Sbjct:  317 RAAYPVDFIPNAVIPGVGGHPQTVVFLTADAFGVMPPIAKLTREQAMYYFLSGYTSKLAGTERGVTEPKATFSTCFGAPFLPRSPMVYANLLGERIARHNASVYLVNTGWTGGPYGTGRRMSLPYTRAMVRAALNGELDKVEFTPDPVFGFLVPKACPGVPAEILNPRNTWAETEKYDAMARKLASLFRENFAKFKDVPV 516          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain HaA2) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.133e-55
Identity = 105/216 (48.61%), Postives = 139/216 (64.35%), Query Frame = -2
Query:  175 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 822
            R+AYP+E IPNA +      PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP   FS CFG+ F+   P+ Y  ML E + KH    WLVNTGW+GG YG G R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPS+ILDP  TWADK A+  T  KL G+F++NF  F       + ++  ++ AA P+
Sbjct:  323 RSAYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPEPEFSTCFGSPFLPRDPSVYGNMLRELIAKHDVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDGSLRNVEFRTDPYFGFAVPTSLHGVPSDILDPVKTWADKAAFDATARKLVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.133e-55
Identity = 103/198 (52.02%), Postives = 133/198 (67.17%), Query Frame = -2
Query:  229 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 822
            R AYP+++IPNA     G  PKN+I+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL NA ++    FG  +P EV GV S ILDP +TWADK AY     KL  +F  NFE F ++
Sbjct:  322 RCAYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVESSILDPRSTWADKVAYDAQAKKLVDMFVSNFEKFESH 519          
BLAST of CX070120 vs. ExPASy Swiss-Prot
Match: PCKA_STAAU (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus aureus GN=pckA PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.479e-55
Identity = 102/195 (52.31%), Postives = 128/195 (65.64%), Query Frame = -2
Query:  238 RAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 822
            RAAYPI +I N  +P    HP  +I L  DAFGV+PP+SKLN  Q MYHF+SG+T+ +AGTE G+ EP  +FS CFGA F  LHPT YA +L E +  H    +LVNTGW+GG YG G RI L YTR++++   SG L NA Y K   FG+ IP E+E VP  IL+P N W+DK+ YK     L   F++NFE F
Sbjct:  321 RAAYPINHIDNIVVPSKAAHPNTIIFLTADAFGVIPPISKLNKDQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFFPLHPTVYADLLGELIDLHDVDVYLVNTGWTGGKYGVGRRISLHYTRQMVNQAISGKLKNAEYTKDSTFGLSIPVEIEDVPKTILNPINAWSDKEKYKAQAEDLIQRFEKNFEKF 515          
The following BLAST results are available for this feature:
BLAST of CX070120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_RHOS11.747e-5652.08Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_MARMM2.282e-5652.31Phosphoenolpyruvate carboxykinase [ATP] OS=Maricau... [more]
PCKA_BRASO2.282e-5649.31Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_FUSNN5.084e-5648.85Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_CAMJR5.084e-5653.73Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_AMOA56.640e-5651.79Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebop... [more]
PCKA1_MOOTA6.640e-5650.50Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moore... [more]
PCKA_RHOP21.133e-5548.61Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_BRUSU1.133e-5552.02Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_STAAU1.479e-5552.31Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14H06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14H06-O12-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070120 ID=CX070120; Name=CX070120; organism=Citrus sinensis; type=EST; length=823bp
TTTTTTTTTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGA
GAACAAGTTTACATATGAATCGAACCACACATGTCGAATATGACTATATT
ACGCTTTATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTG
TTCTTCACTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTT
CAGTGAGCTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAG
TTCCTCTTGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTG
CTTGTCTGCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCT
CGACTTCAGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTT
GCATTCAACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTA
CGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAG
TGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGC
ATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCA
AGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTA
CCAAAGCAGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTC
AGCTTGCTCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGAT
GACATTCTTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATAT
ACTCAATGGGGTAGGCAGCACGA
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