CX070084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_MYCLE (Acetolactate synthase small subunit OS=Mycobacterium leprae GN=ilvH PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.987e-31 Identity = 72/158 (45.57%), Postives = 106/158 (67.09%), Query Frame = 2 Query: 236 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRREKLG 703 HT+SV V D G++ R+A +F+RRG+NIESLAVG + K + TIVV + L+QV +QL KL+NV+KV + + + REL LIKV A+ R+++ V +FRA+++D+S SLT+E TGD K+ A+ R L FG+REI ++G ++L R G Sbjct: 7 HTLSVLVEDTPGVLARVAALFSRRGFNIESLAVGATECKTMSRMTIVVSAEETPLEQVTKQLHKLINVIKVVEQEADNSLSRELALIKVRAEAGTRSQVIEAVHLFRARVIDVSLESLTVEATGDCSKIEALLRVLEPFGVREIVQSGVVSLSRGPRG 164
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_METTH (Probable acetolactate synthase small subunit OS=Methanobacterium thermoautotrophicum GN=ilvH PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.695e-29 Identity = 70/155 (45.16%), Postives = 104/155 (67.10%), Query Frame = 2 Query: 236 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKF-RAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRR 691 H IS V + G++ R+AG+F RRG+NIE++ VG ++ + TI+ G D+VL+Q+ +QL KL++V+KV DL V+REL ++KV+A + R+EI +IFR +IVD+S +LT+EVTGD K+ A L FGI+E+ARTG A+ R Sbjct: 9 HIISALVEHKPGVLQRVAGLFTRRGFNIENITVGESETPGIARMTIIARGDDRVLEQITKQLNKLIDVIKVRDLEPAATVKRELCMVKVHAPSESERSEIIQYTNIFRGRIVDVSPDALTVEVTGDSEKIDAFLELLRNFGIKELARTGPTAMSR 163
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_MYCAV (Acetolactate synthase small subunit OS=Mycobacterium avium GN=ilvH PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.215e-27 Identity = 66/136 (48.53%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 236 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLN--KDKALFTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNL 637 HT+SV V + G++ R+A +F+RRG+NIESLAVG KD + TIVV + L+Q+ +QL KL+NV+K+ +L + V REL LIKV AD R+++ V++FRAK++D+S +LTIE TGD GK+ A+ R L Sbjct: 6 HTLSVLVEAKPGVLARVAALFSRRGFNIESLAVGATEQKDMSRMTIVVSAEETPLEQITKQLNKLINVIKIVELEDGNSVSRELALIKVRADAGTRSQVIEAVNLFRAKVIDVSPEALTIEATGDRGKIEALLRVL 141
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_METJA (Probable acetolactate synthase small subunit OS=Methanocaldococcus jannaschii GN=ilvH PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27 Identity = 66/155 (42.58%), Postives = 102/155 (65.81%), Query Frame = 2 Query: 236 HTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPK-FRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRR 691 H IS V ++ G++ RI+G+F RRG+NI S+ VG+ ++ + TIVV G DK+L+QV++QL KL++V+KV +L + V+REL LIK+ A + ++++ IFR +VD+S SL +E+TG K+ A + GI+E+ARTG AL R Sbjct: 9 HVISALVLNKPGVLQRISGLFTRRGFNISSITVGITENPQISRVTIVVNGDDKILEQVIKQLNKLIDVIKVSELEEKKSVQRELCLIKIYAPTESAKSQVIQYTSIFRGNVVDLSPESLIVEITGSEDKINAFIDLVKPLGIKEMARTGITALAR 163
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_BACSU (Acetolactate synthase small subunit OS=Bacillus subtilis GN=ilvH PE=3 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.754e-26 Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 2 Query: 242 ISVFVGDESGMINRIAGVFARRGYNIESLAVGLNK----DKALFTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRR 691 I++ V + SG++NRI G+F +R YNIES+ VG + + F + V G + V +Q+ +QL K ++VLKV D++N+ V+REL LIKV + P R EI +++ FRA +VD+S S+ ++VTG+ K+ A+ L +GI+EIARTG A R Sbjct: 5 ITLTVVNRSGVLNRITGLFTKRHYNIESITVGHTETAGVSRITFVVHVEGENDV-EQLTKQLNKQIDVLKVTDITNQSIVQRELALIKVVSAPSTRTEINGIIEPFRASVVDVSRDSIVVQVTGESNKIEALIELLKPYGIKEIARTGTTAFAR 157
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_ECOLI (Acetolactate synthase isozyme 3 small subunit OS=Escherichia coli (strain K12) GN=ilvH PE=1 SV=3) HSP 1 Score: 113.62 bits (283), Expect = 1.257e-24 Identity = 64/155 (41.29%), Postives = 101/155 (65.16%), Query Frame = 2 Query: 242 ISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKM---VAVQRNLSKFGIREIARTGKIALRR 691 +SV + +ESG ++R+ G+F++RGYNIESL V D L TI G +KVL+Q+ +QL KLV+VL+V +L VERE+ML+K+ A R E++ +IFR +I+D++ T+++ G GK+ +A R+++K I E+AR+G + L R Sbjct: 5 LSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSLYTVQLAGTSGKLDAFLASIRDVAK--IVEVARSGVVGLSR 157
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_SALTY (Acetolactate synthase isozyme 3 small subunit OS=Salmonella typhimurium GN=ilvH PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.776e-24 Identity = 63/155 (40.65%), Postives = 100/155 (64.52%), Query Frame = 2 Query: 242 ISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKM---VAVQRNLSKFGIREIARTGKIALRR 691 +SV + +ESG ++R+ G+F++RGYNIESL V D L TI G +KVL+Q+ +QL KLV+VL+V +L VERE+ML+K+ A R E++ +IFR +I+D++ T+++ G K+ +A R+++K I E+AR+G + L R Sbjct: 5 LSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGREEVKRNTEIFRGQIIDVTPTLYTVQLAGTSDKLDAFLASLRDVAK--IVEVARSGVVGLSR 157
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_HAEIN (Acetolactate synthase small subunit OS=Haemophilus influenzae GN=ilvH PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.423e-22 Identity = 62/153 (40.52%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 242 ISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVA-VQRNLSKFGIREIARTGKIALRR 691 +SV + +ESG ++R+ G+F++R +NIESL V D L TI G + L+Q+ +QL KLV+V KV +LS + +ERE++L KV A R EI+ L DIFR +IVD++ S TI+++G K+ A + + + EI R+G I++ R Sbjct: 5 LSVLLENESGALSRVVGLFSQRAFNIESLTVAPTDDPTLSRMTIEAVGDAQALEQIEKQLHKLVDVFKVVNLSEQEHIEREIVLAKVRAVGSSRDEIKRLADIFRGQIVDVTPKSYTIQLSGTNDKVDAFISALKEETTLLEIVRSGLISVSR 157
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_LACLA (Acetolactate synthase small subunit OS=Lactococcus lactis subsp. lactis GN=ilvH PE=3 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.301e-21 Identity = 57/146 (39.04%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 266 SGMINRIAGVFARRGYNIESLAVGLNKDKAL----FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFGIREIARTGKIALRR 691 +G++NR V RR NI S+ G+ + + L F I V D+V +Q+++QL +L++V++V D+++ P VERE++LIKV+A P RAEI +++ FR +VD++ ++TI++TGD K+ A+ +S +GI +ARTG R Sbjct: 13 TGIMNRFTAVLNRRQVNILSITAGVTESQDLTHTTFVIEVDHLDEV-EQIIKQLNRLIDVIEVADITDLPHVEREVVLIKVSAPPTIRAEIFTMIEPFRVNVVDVNLENVTIQLTGDSAKIEALIDVVSPYGILNMARTGSAGFER 157
BLAST of CX070084 vs. ExPASy Swiss-Prot
Match: ILVH_BUCAI (Acetolactate synthase small subunit OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ilvH PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.455e-21 Identity = 50/153 (32.68%), Postives = 97/153 (63.40%), Query Frame = 2 Query: 242 ISVFVGDESGMINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVYGTDKVLQQVMEQLQKLVNVLKVEDLSNEPQVERELMLIKVNADPKFRAEIRWLVDIFRAKIVDISEYSLTIEVTGDPGKMVAVQRNLSKFG-IREIARTGKIALRR 691 +S+ + +ESG ++R+ G+F++RGYNIE++ + +D L TI G +K ++Q+ +QL KL++VL+V + +ERE++L+KV + R +I+ + ++FR +IVDI+ + ++++G K+ A + + F I E+ R+G + + R Sbjct: 5 LSILLENESGALSRVIGLFSQRGYNIETITLAPTEDPTLSKMTIQTVGNEKAIEQIEKQLHKLIDVLRVVQIGQSSHIEREIVLLKVQINNHRRDDIKHITEVFRGQIVDITSATYILQLSGTTKKIDAFLKIIRNFSEIIEVTRSGIVGISR 157 The following BLAST results are available for this feature:
BLAST of CX070084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070084 ID=CX070084; Name=CX070084; organism=Citrus sinensis; type=EST; length=790bpback to top |