CX070080

Overview
NameCX070080
Unique NameCX070080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070080 vs. ExPASy Swiss-Prot
Match: MIOX_RAT (Inositol oxygenase OS=Rattus norvegicus GN=Miox PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.698e-69
Identity = 119/245 (48.57%), Postives = 171/245 (69.80%), Query Frame = 3
Query:    9 YRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLXW 740
            Y++ H +QT DFV + R ++G  +  +M++ E  ++L+D+VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGK+L L    G PQWAVVGDTFPVGC    S+V     F++NPD  +P ++TE G+Y   CGL+NV+MSWGHD+Y+Y + K NK +LPS A +++R+HSFY  H    Y+ L +++D++ L W++ F+K+DLY+K     +V+ ++PYY  LI+KY P  L W
Sbjct:   44 YKLMHTHQTVDFVMRKRIQFGSFSYKKMTVMEAVDMLDDLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKILAL---WGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLENVLMSWGHDEYLYQMMKFNKFSLPSEAFYMVRFHSFYPWHTGGDYRQLCSQQDLDMLPWVQEFNKFDLYTKCPDLPEVKSLRPYYQGLIDKYCPGILSW 285          
BLAST of CX070080 vs. ExPASy Swiss-Prot
Match: MIOX_PONAB (Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.218e-69
Identity = 123/245 (50.20%), Postives = 167/245 (68.16%), Query Frame = 3
Query:    9 YRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLXW 740
            Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVGDTFPVGC    S+V     F++NPD  +P ++TE G+Y   CGLD V+MSWGHD+YMY V K NK +LP  A ++IR+HSFY  H    Y+ L +++D+  L W++ F+K+DLY+K     DV+K++PYY  LI+KY P  L W
Sbjct:   44 YKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGSDYQQLCSQQDLAMLPWVQEFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285          
BLAST of CX070080 vs. ExPASy Swiss-Prot
Match: MIOX_HUMAN (Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.783e-69
Identity = 123/245 (50.20%), Postives = 166/245 (67.76%), Query Frame = 3
Query:    9 YRINHINQTYDFVKKMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYSNPAFNTEYGVYSEGCGLDNVMMSWGHDDYMYLVAKENKTTLPSAALFIIRYHSFYALHKSEAYKHLMNEEDVENLKWLETFSKYDLYSKSKVRIDVEKVKPYYLSLIEKYFPAKLXW 740
            Y++ H +QT DFV+    ++G  +  +M++ E  +LL+ +VDESDPD+D P   H  QTAE IRK +PD+DW HL GL+HDLGKVL L    G PQWAVVGDTFPVGC    S+V     F++NPD  +P ++TE G+Y   CGLD V+MSWGHD+YMY V K NK +LP  A ++IR+HSFY  H    Y+ L +++D+  L W+  F+K+DLY+K     DV+K++PYY  LI+KY P  L W
Sbjct:   44 YKLMHTHQTVDFVRSKHAQFGGFSYKKMTVMEAVDLLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLAL---FGEPQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPRYSTELGMYQPHCGLDRVLMSWGHDEYMYQVMKFNKFSLPPEAFYMIRFHSFYPWHTGRDYQQLCSQQDLAMLPWVREFNKFDLYTKCPDLPDVDKLRPYYQGLIDKYCPGILSW 285          
The following BLAST results are available for this feature:
BLAST of CX070080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX_RAT1.698e-6948.57Inositol oxygenase OS=Rattus norvegicus GN=Miox PE... [more]
MIOX_PONAB2.218e-6950.20Inositol oxygenase OS=Pongo abelii GN=MIOX PE=2 SV... [more]
MIOX_HUMAN3.783e-6950.20Inositol oxygenase OS=Homo sapiens GN=MIOX PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14F06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14F06-K12-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070080 ID=CX070080; Name=CX070080; organism=Citrus sinensis; type=EST; length=799bp
AGAATTTCTACAGAATCAATCACATTAATCAGACATATGACTTTGTGAAG
AAGATGAGGGAGGAGTATGGCAAATTAAACAGAGTGGAAATGAGCATTTG
GGAATGCTGTGAACTTCTGAATGATGTGGTGGATGAGAGCGATCCAGACC
TGGATGAACCTCAAATTGAGCACCTGCTGCAGACTGCCGAAGCTATCAGA
AAGGACTATCCTGATGAAGATTGGCTTCACTTGACTGGCCTTATCCATGA
TCTTGGTAAGGTGCTAAATCTTCCTAGCTTTGGAGGGCTTCCTCAATGGG
CAGTAGTTGGTGACACTTTCCCTGTTGGCTGTGCTTTCGATGAATCCATC
GTTCATCACAAGTATTTTAAAGAAAATCCAGACTACTCCAACCCTGCTTT
CAACACTGAATATGGAGTTTACTCAGAAGGATGCGGATTGGACAATGTAA
TGATGTCGTGGGGGCACGATGACTACATGTACTTGGTGGCCAAGGAAAAC
AAAACAACTCTGCCTTCAGCAGCTCTTTTCATCATTAGATACCACTCATT
CTATGCGCTGCACAAATCAGAAGCATACAAACACTTAATGAACGAGGAGG
ATGTAGAAAATCTGAAGTGGCTTGAAACATTCAGCAAATATGACCTTTAT
AGCAAGAGCAAAGTCCGGATAGATGTGGAAAAGGTCAAGCCTTACTATCT
CTCCCTCATTGAAAAGTATTTCCCGGCGAAGCTAANATGGTGAGACTCGA
GAGTTTTCTGAAACTGGCGATGGCTCAATATGGGTACTGATGTGGTCAG
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