CX070078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACC3 (50S ribosomal protein L13 OS=Bacillus cereus (strain 03BB102) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACC1 (50S ribosomal protein L13 OS=Bacillus cereus (strain ATCC 10987) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACC0 (50S ribosomal protein L13 OS=Bacillus cereus (strain AH820) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACAN (50S ribosomal protein L13 OS=Bacillus anthracis GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACAH (50S ribosomal protein L13 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACAC (50S ribosomal protein L13 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_BACAA (50S ribosomal protein L13 OS=Bacillus anthracis (strain A0248) GN=rplM PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.280e-24 Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = -3 Query: 272 RWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 652 +W V DA+GQ LGRLAS+VA++++GK+KPT+ P+ D GD I++NA+ I +TG KL +K+YY HT + G LK+RT E P + + A+ MLP+ ++ G+EHP + E Y Sbjct: 15 KWYVVDAEGQTLGRLASEVASILRGKNKPTFTPHVDTGDHVIIINAEKIHLTGNKLNDKIYYRHTNHPGGLKQRTALEMRTNYPVQMLELAIKGMLPKGRLGRQVSKKLNVYAGAEHPHQAQKPEVY 141
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_TRIEI (50S ribosomal protein L13 OS=Trichodesmium erythraeum (strain IMS101) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = -3 Query: 299 NLEGLRWRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHP 667 ++EG +W V DA+GQ LGRLA+ +A +++GK+KPTY P+ D GD IV+NA+ + VTG+K K+Y H+G G +K + R P I +AV MLP+N +++PGS HP Sbjct: 10 DIEGKKWYVIDAEGQRLGRLATAIAMIIRGKNKPTYTPHMDTGDFVIVVNAEKVTVTGKKSSQKLYRRHSGRPGGMKTEVFSKLQARLPQRIIEEAVFGMLPKNSLGRKLHNKLKVYPGSNHP 132
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_MYCLE (50S ribosomal protein L13 OS=Mycobacterium leprae GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 52/126 (41.27%), Postives = 80/126 (63.49%), Query Frame = -3 Query: 272 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 649 W V DA VLGRLA+ AT+++GK KPT+APN D GD IV+NA + ++G K+++K+ Y H+GY G L++RT+ E M++ P + KA++ MLP+N R++ G +HP + P+ Sbjct: 15 WYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPF 140
BLAST of CX070078 vs. ExPASy Swiss-Prot
Match: RL13_MYCLB (50S ribosomal protein L13 OS=Mycobacterium leprae (strain Br4923) GN=rplM PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.202e-24 Identity = 52/126 (41.27%), Postives = 80/126 (63.49%), Query Frame = -3 Query: 272 WRVFDAKGQVLGRLASQVATVVQGKDKPTYAPNRDDGDMCIVLNAKDICVTGRKLKNKVYYWHTGYIGHLKERTLKEQMERDPTEAIRKAVLRMLPRNXXXXXXXXXXRIFPGSEHPFGDRPLEPY 649 W V DA VLGRLA+ AT+++GK KPT+APN D GD IV+NA + ++G K+++K+ Y H+GY G L++RT+ E M++ P + KA++ MLP+N R++ G +HP + P+ Sbjct: 15 WYVIDATDVVLGRLAAVAATLLRGKHKPTFAPNVDGGDFVIVINADKVAISGDKVQHKMVYRHSGYPGGLRKRTIGELMQKHPDRVVEKAIVGMLPKNKLSRQIQRKLRVYAGPDHPHSAQQPVPF 140 The following BLAST results are available for this feature:
BLAST of CX070078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070078 ID=CX070078; Name=CX070078; organism=Citrus sinensis; type=EST; length=795bpback to top |