CX070064

Overview
NameCX070064
Unique NameCX070064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT2C2_RAT (Calcium-transporting ATPase type 2C member 2 OS=Rattus norvegicus GN=Atp2c2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 68/234 (29.06%), Postives = 101/234 (43.16%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVE--------------AYVGGRKIDPTDSN---SQLSPMVTSLLVEG--IAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVH--IHWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLRCVAIA 761
            PEGLP+ V +TL   + +M   + +V++L   ET+G    ICSDKTGTLT N+MT  +               Y G   +    S     + S +    LVE   +A N            +  V G PTE A++   MK  MN  +++         PF+S +K   V   L N +       KGA E V+  C+ Y +    L    + K    ++  + M S  LR +A+A
Sbjct:  334 PEGLPIVVMVTLVLGVLRMAKKRVIVKKLPIVETLGCCNVICSDKTGTLTANEMTATQLVTSDGFHAEVSGIGYSGEGTVCLLPSKEVIKEFSNVSVGKLVEAGCVANNAVVR--------KNAVMGQPTEGALVVLAMK--MNLGSIKDSYIRKKEIPFSSEQKWMAVRCSLKNEDEEDVYFMKGAFEEVIHHCSTYNNGGIPLPLTPQQKSYC-QQEEKKMGSLGLRVLALA 556          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A1_BUFMA (Sodium/potassium-transporting ATPase subunit alpha-1 OS=Bufo marinus GN=ATP1A1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12
Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR--KIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGE------AEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPN---SEVHIHWKGAAEIVLDSCT 647
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +   +  + D T++ S     + SP  T+L    IA     +V+  P G E       +V G  +E A+L+       + + +R +   +   PFNS  K      +  N   S   +  KGA E +LD C+
Sbjct:  333 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGASFDKSSPTWTAL--ARIAGLCNRAVF--PAGQENTPILKRDVVGDASESALLKCIELCCGSVKDMREKNQKVAEIPFNSTNKYQLSVHKNANPSESRYLLVMKGAPERILDRCS 519          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: ECA3_ARATH (Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA3 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 71/286 (24.83%), Postives = 114/286 (39.86%), Query Frame = 3
Query:   72 GAIKILXXXXXXXXXXXPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKIDPTDSNSQLSPMVTSLLVEGIAQNTTGSVY--------LP------------------------PNGGEAEVSGSPTEKAILQWGMKLGM-NFEAVRSECSVL------------------HVFPFNSLKKRGGVAVQLPNSEVHIHW-KGAAEIVLDSCTRYI-DTDDHLVEMDEDKLLTFKKAIEDMASCSLRCVAIAYRT 770
            GAI              PEGLP  VT  LA   +KM    A+VR L + ET+G  T ICSDKTGTLT N M+V +  V          +++  PM+    V G      G+V+        LP                        P+    E  G  TE A+     K+G+  F+++ S  ++L                   V+     + R  ++V   + ++ + + KGA E ++  C + + + D  +V +        +         +LRC+A+A++T
Sbjct:  287 GAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVSKICV--------VQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLAMCSSLCNDSILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQFKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGRAELESRFYSFGDETLRCLALAFKT 564          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A2_PONAB (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Pongo abelii GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 66/224 (29.46%), Postives = 104/224 (46.43%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGG--RKIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS-------GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK-RGGVAVQLPNSEVHI-HWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLR 746
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +     R+ D T+  S     + SP  T+L    IA     +V+     G+  +S       G  +E A+L+       +   +R     +   PFNS  K +  +  +  + + H+   KGA E +LD C   +      + +D++    F+ A  ++     R
Sbjct:  331 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIREADTTEDQSGATFDKRSPTWTAL--SRIAGLCNRAVF---KAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCPTIL-VQGKEIPLDKEMQDAFQNAYMELGGLGER 548          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A2_RAT (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 65/224 (29.02%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR--KIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS-------GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK-RGGVAVQLPNSEVHI-HWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLR 746
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +   +  + D T+  S     + SP  T+L    IA     +V+     G+  +S       G  +E A+L+       +   +R     +   PFNS  K +  +  +  + + H+   KGA E +LD C+  +      + +D++    F+ A  ++     R
Sbjct:  331 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTAL--SRIAGLCNRAVF---KAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCSTIL-VQGKEIPLDKEMQDAFQNAYMELGGLGER 548          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A2_MOUSE (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Mus musculus GN=Atp1a2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 65/224 (29.02%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR--KIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS-------GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK-RGGVAVQLPNSEVHI-HWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLR 746
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +   +  + D T+  S     + SP  T+L    IA     +V+     G+  +S       G  +E A+L+       +   +R     +   PFNS  K +  +  +  + + H+   KGA E +LD C+  +      + +D++    F+ A  ++     R
Sbjct:  331 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTAL--SRIAGLCNRAVF---KAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCSTIL-VQGKEIPLDKEMQDAFQNAYMELGGLGER 548          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A2_HUMAN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Homo sapiens GN=ATP1A2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 65/224 (29.02%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR--KIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS-------GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK-RGGVAVQLPNSEVHI-HWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLR 746
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +   +  + D T+  S     + SP  T+L    IA     +V+     G+  +S       G  +E A+L+       +   +R     +   PFNS  K +  +  +  + + H+   KGA E +LD C+  +      + +D++    F+ A  ++     R
Sbjct:  331 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTAL--SRIAGLCNRAVF---KAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCSTIL-VQGKEIPLDKEMQDAFQNAYMELGGLGER 548          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT12A_BUFMA (Potassium-transporting ATPase alpha chain 2 OS=Bufo marinus GN=ATP12A PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12
Identity = 64/233 (27.47%), Postives = 105/233 (45.06%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVV------EAYVGGRKIDPTDSNSQLSPMVTSLLVEGI-----AQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVH--------IHWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLRCVAIAY 764
            PEGL   VT+TL+ + ++M     LV+ L A ET+GS + ICSDKTGTLT N+MTV         ++     D +  + + +P   + L + +     A+   G   +P    +    G  +E A+L++   +  N   +RS+   +   PFNS  K      QL   E          +  KGA E +L+ C+  +     L  +DE    +F+ A  ++     R +   +
Sbjct:  351 PEGLLATVTVTLSLTAKRMAKKNCLVKNLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDDHIHIADTSEDQSHHSFEQTPETWNALCKIVSLCNRAEFKAGQDDVPIM--KKVAVGDASETALLKFSEVITGNVMNIRSQNRKVCEIPFNSTNK-----FQLSIHETDDPQDQRLLLVMKGAPERILEKCSTIMIGGKEL-PLDESMKDSFQTAYMELGGLGERVLGFCH 575          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: PMA1_NEUCR (Plasma membrane ATPase OS=Neurospora crassa GN=pma-1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 62/229 (27.07%), Postives = 104/229 (45.41%), Query Frame = 3
Query:   78 IKILXXXXXXXXXXXPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAY-VGGRKIDPTDSNSQLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVSGSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKKRGGVAVQLPNSEVHIHWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLRCVAIA 761
            ++IL           P GLP  VT T+A     +   KA+V++LSA E++     +CSDKTGTLT N++++ + Y V G  +DP D       M+T+ L     +    ++                +KA L+  +K     ++V S+  VL   PF+ + K+    V+ P  E     KGA   VL +       +DH +  + D+   +K  + + A+   R + +A
Sbjct:  320 VQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG--VDPEDL------MLTACLAASRKKKGIDAI----------------DKAFLK-SLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTV-----EEDHPIPEEVDQ--AYKNKVAEFATRGFRSLGVA 516          
BLAST of CX070064 vs. ExPASy Swiss-Prot
Match: AT1A2_BOVIN (Sodium/potassium-transporting ATPase subunit alpha-2 OS=Bos taurus GN=ATP1A2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.893e-12
Identity = 65/224 (29.02%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  123 PEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGR--KIDPTDSNS-----QLSPMVTSLLVEGIAQNTTGSVYLPPNGGEAEVS-------GSPTEKAILQWGMKLGMNFEAVRSECSVLHVFPFNSLKK-RGGVAVQLPNSEVHI-HWKGAAEIVLDSCTRYIDTDDHLVEMDEDKLLTFKKAIEDMASCSLR 746
            PEGL   VT+ L  + ++M     LV+ L A ET+GS +TICSDKTGTLT N+MTV   +   +  + D T+  S     + SP  T+L    IA     +V+     G+  +S       G  +E A+L+       +   +R     +   PFNS  K +  +  +  + + H+   KGA E +LD C+  +      + +D++    F+ A  ++     R
Sbjct:  331 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTAL--SRIAGLCNRAVF---KAGQENISVSKRDTAGDASESALLKCIELSCGSVRKMRDRNPKVAEIPFNSTNKYQLSIHEREDSPQSHVLVMKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGER 548          
The following BLAST results are available for this feature:
BLAST of CX070064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
AT2C2_RAT1.814e-1229.06Calcium-transporting ATPase type 2C member 2 OS=Ra... [more]
AT1A1_BUFMA1.814e-1233.51Sodium/potassium-transporting ATPase subunit alpha... [more]
ECA3_ARATH3.094e-1224.83Calcium-transporting ATPase 3, endoplasmic reticul... [more]
AT1A2_PONAB3.094e-1229.46Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_RAT5.278e-1229.02Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_MOUSE5.278e-1229.02Sodium/potassium-transporting ATPase subunit alpha... [more]
AT1A2_HUMAN5.278e-1229.02Sodium/potassium-transporting ATPase subunit alpha... [more]
AT12A_BUFMA5.278e-1227.47Potassium-transporting ATPase alpha chain 2 OS=Buf... [more]
PMA1_NEUCR6.893e-1227.07Plasma membrane ATPase OS=Neurospora crassa GN=pma... [more]
AT1A2_BOVIN6.893e-1229.02Sodium/potassium-transporting ATPase subunit alpha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14E09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14E09-I18-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070064 ID=CX070064; Name=CX070064; organism=Citrus sinensis; type=EST; length=770bp
GCCACACCAAAAATGCTGATGGAAGTATTCAGTTTAGAGCAGGCAAGACA
AAAGTTAGCCATGCTGTTGACGGTGCCATTAAAATCCTGACTGTTGCTGT
CACTATTGTTGTAGTTGCAGTGCCTGAAGGGCTTCCTCTAGCTGTTACCT
TAACACTTGCCTACTCTATGAGGAAGATGATGGCAGACAAAGCCTTGGTC
AGGAGACTATCTGCCTGTGAGACAATGGGCTCAGCTACAACAATTTGTAG
TGATAAGACTGGAACATTAACCTTGAATCAGATGACAGTGGTTGAAGCTT
ATGTTGGAGGGAGAAAGATCGATCCTACGGATAGCAATTCACAGTTGTCC
CCAATGGTGACCTCATTACTTGTTGAAGGCATTGCACAGAATACAACCGG
CAGTGTTTATCTCCCTCCGAACGGTGGAGAGGCAGAGGTCTCTGGATCAC
CTACAGAAAAGGCCATTCTTCAATGGGGAATGAAGCTGGGGATGAATTTT
GAAGCTGTTAGATCTGAATGTTCTGTTCTTCATGTTTTCCCATTCAATTC
ACTGAAAAAACGAGGAGGTGTTGCAGTACAGTTGCCCAACTCTGAAGTTC
ACATACACTGGAAGGGTGCTGCCGAAATAGTTTTAGATTCATGCACGCGG
TACATTGACACAGATGATCACTTGGTTGAAATGGATGAAGATAAGCTGTT
GACTTTTAAGAAAGCTATTGAAGATATGGCTTCTTGTAGTTTACGCTGTG
TTGCAATTGCATATCGAACA
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