CX070063

Overview
NameCX070063
Unique NameCX070063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA2_ORYSJ (Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.980e-27
Identity = 56/133 (42.11%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  436 IMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 834
            +MWRN++ Q+ YQ +V+  L  QGK +  LE     H++ V NT+IFN+FV CQ+FNE ++R+ ++ N+  G+  N +F+G++  T+  Q +++QFLG FA+TT L  + W+IS++ GF+  P+A   KLI V
Sbjct:  892 VMWRNIVGQSLYQFAVMWYLQTQGKHLFGLEG---YHADIVLNTIIFNTFVFCQVFNEISSREMEDINVLRGMAGNSIFLGVLTGTIFFQFILVQFLGDFANTTPLTQQQWLISILFGFLGMPIAAAIKLIAV 1021          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA1_ARATH (Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 6.639e-27
Identity = 56/133 (42.11%), Postives = 90/133 (67.67%), Query Frame = -3
Query:  436 IMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 834
            +MWRN+L Q+ YQ+ ++  L  +GK +  L+      S+   NTLIFN FV CQ+FNE ++R+ ++ ++F GI KN +F+ ++  T+V Q++II+ LG FA TT LN   W++S+++GF+  P+A   K+IPV
Sbjct:  888 VMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPD---SDLTLNTLIFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKMIPV 1017          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA1_ORYSJ (Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.132e-26
Identity = 58/133 (43.61%), Postives = 89/133 (66.92%), Query Frame = -3
Query:  436 IMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 834
            +MWRN+L Q+ YQ  V+  L  QGK +  L+      +  V NT+IFNSFV CQ+FNE ++R+ ++ N+  GI KN +F+G++  T+V Q +++QFLG+FA+T  L    WI SV++G I  P++ + KL+PV
Sbjct:  888 VMWRNILGQSFYQFIVMWYLQTQGKSMFGLDGPD---AEVVLNTIIFNSFVFCQVFNEISSREMEKINVLRGILKNYVFLGVLTSTVVFQFIMVQFLGEFANTIPLTRLQWIASVLLGLIGMPISAIIKLLPV 1017          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA2_ARATH (Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.295e-26
Identity = 61/132 (46.21%), Postives = 85/132 (64.39%), Query Frame = -3
Query:  436 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 831
            MWRN+L QA YQ  V+ +L  +GK +  L+      S  + NTLIFN FV CQ+FNE ++R+ +E ++F GI  N +F+ ++  T+  QI+II+FLG FASTT L    WI S+ IGF+  P+A   K IPV
Sbjct:  886 MWRNILGQAVYQFIVIWILQAKGKAMFGLDGPD---STLMLNTLIFNCFVFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA7_ARATH (Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.643e-25
Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = -3
Query:  436 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 831
            MWRN+L QA YQ  ++ +L  +GK +  L       S  V NTLIFN FV CQ+FNE ++R+ +E ++F GI  N +F+ ++  T+  QI+II+FLG FASTT L    W  S+ +GF+  P+A   K IPV
Sbjct:  887 MWRNILGQAVYQFIIIWILQAKGKSMFGLVGSD---STLVLNTLIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ACA3_ORYSJ (Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.611e-23
Identity = 52/133 (39.10%), Postives = 87/133 (65.41%), Query Frame = -3
Query:  436 IMWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 834
            +MWRN++ Q+ YQ+ VL VL  +GK +L +   +   ++ + NT +FN+FV CQ+FNE N+R+ ++ N+F GI  + +F  +V VT   Q+++++ LG FA+T  L+ K W+ SV+IG +   +  + K IPV
Sbjct:  891 VMWRNIVGQSIYQLVVLGVLLLRGKSLLQI---NGPQADSLLNTFVFNTFVFCQVFNEVNSREMEKINVFSGIFSSWIFSAVVGVTAGFQVIMVELLGTFANTVHLSGKLWLTSVLIGSVGLVIGAILKCIPV 1020          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ATC2_SCHPO (Calcium-transporting ATPase 2 OS=Schizosaccharomyces pombe GN=pmc1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.987e-19
Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = -3
Query:  439 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKNTLIFNSFVLCQIFNEFNARKPDEK-NIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIP 831
            MW+ ++ Q+ YQ++V LVL+F G  I +  S++        NT++FN+FV  Q+FNE N R+ D K NIF  I  N LF+ I  +   +Q++I+ F G   S  R++ K W IS+V G IS PL  L + +P
Sbjct: 1014 MWKMIICQSMYQLAVTLVLHFAGNSIFHYPSNT-----ADMNTIVFNTFVWLQLFNEINNRRLDNKLNIFERINHNFLFIAIFVIVAGIQVIIVFFGGAAFSVKRIDGKGWAISIVFGVISIPLGALIRCVP 1140          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B1_RAT (Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus GN=Atp2b1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ V+  L F G++  +++S  NA  H+   ++ T++FN+FVL Q+FNE NARK   E+N+F GI  N +F  IV  T V+QI+I+QF GK  S + L+ + W+ S+ +G
Sbjct:  928 MMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLG 1048          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B1_PIG (Plasma membrane calcium-transporting ATPase 1 OS=Sus scrofa GN=ATP2B1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ V+  L F G++  +++S  NA  H+   ++ T++FN+FVL Q+FNE NARK   E+N+F GI  N +F  IV  T V+QI+I+QF GK  S + L+ + W+ S+ +G
Sbjct:  928 MMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLG 1048          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B1_HUMAN (Plasma membrane calcium-transporting ATPase 1 OS=Homo sapiens GN=ATP2B1 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-17
Identity = 51/121 (42.15%), Postives = 79/121 (65.29%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ V+  L F G++  +++S  NA  H+   ++ T++FN+FVL Q+FNE NARK   E+N+F GI  N +F  IV  T V+QI+I+QF GK  S + L+ + W+ S+ +G
Sbjct:  928 MMKNILGHAFYQLVVVFTLLFAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFGGKPFSCSELSIEQWLWSIFLG 1048          
The following BLAST results are available for this feature:
BLAST of CX070063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ACA2_ORYSJ2.980e-2742.11Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA1_ARATH6.639e-2742.11Calcium-transporting ATPase 1, chloroplastic OS=Ar... [more]
ACA1_ORYSJ1.132e-2643.61Calcium-transporting ATPase 1, plasma membrane-typ... [more]
ACA2_ARATH3.295e-2646.21Calcium-transporting ATPase 2, plasma membrane-typ... [more]
ACA7_ARATH3.643e-2544.70Putative calcium-transporting ATPase 7, plasma mem... [more]
ACA3_ORYSJ2.611e-2339.10Calcium-transporting ATPase 3, plasma membrane-typ... [more]
ATC2_SCHPO2.987e-1940.15Calcium-transporting ATPase 2 OS=Schizosaccharomyc... [more]
AT2B1_RAT1.255e-1742.15Plasma membrane calcium-transporting ATPase 1 OS=R... [more]
AT2B1_PIG1.255e-1742.15Plasma membrane calcium-transporting ATPase 1 OS=S... [more]
AT2B1_HUMAN1.255e-1742.15Plasma membrane calcium-transporting ATPase 1 OS=H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14E09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14E09-I18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070063 ID=CX070063; Name=CX070063; organism=Citrus sinensis; type=EST; length=836bp
GAATTAGGGTACCGCGGCCCCCCCTTTTTTTTTTTTTGCCTAACACATCA
TCAAGAAAGATGAGCTGCACACAAGTTCCAAAAACGTAATATCTGACATC
GTAGCTGTGCAAAATATAGCTTGTGTATTGTTAAGCCAGTTAATTGGAAA
ACATCTCTATGAACATAGATCTCTCCTTCAACTATCCTTGTTAGTCAAAA
ATCGAATTTTCCTATTCATATTGAATTCATATGTATCTTCAAATCTGTGG
ATTTTTTTTTTTTTTTATCCTGTCAACCAAAAAAGGACAGCACATTCTAC
AAAAGCCTGAAATATTGACAAACCAAGTGATCCAGATGAATCCGGGCACC
TTCCCATTGGTTAACTTTCCTAATTTCTTTGTTGAGAACGTCTTCTTTTG
AATACATTGAAAATATTACTGAAGGGAGTTGCTGGCACAGGTATCAATTT
CCCCAGAATAGCGAGGGGCCAACTGATGAAGCCAATGACGACGGAAATAA
TCCAGTGCTTCCAATTAAGCCTGGTAGTTGATGCAAACTTCCCAAGAAAC
TGAATGATAAGTATCTGAAGTACAAGAGTTACTGCCACTATCCCCATAAA
AAGACGGTTCTTAGTAATTCCTCCGAAAATATTTTTTTCATCAGGCTTCC
GAGCATTAAATTCATTAAAGATCTGGCAAAGGACAAAAGAATTGAATATC
AGAGTATTTTTTACTTTGTTGGAATGGGCATTGGAATCACTCTCCAGGTT
CAGAATCCTCTTCCCTTGAAAATTCAGGACAAGCAGGACACTTACTTGGT
AGGAAGCCTGTATTAAGAGATTCCTCCACATTATAT
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