CX070063

Overview
NameCX070063
Unique NameCX070063
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B4_HUMAN (Plasma membrane calcium-transporting ATPase 4 OS=Homo sapiens GN=ATP2B4 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17
Identity = 49/121 (40.50%), Postives = 76/121 (62.81%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ V+ +L F G++  +++S   A  HS   ++ T++FN+FVL Q+FNE N+RK   EKN+F GI +N +F  +V  T + QI I++F GK  S T L+   W+  + IG
Sbjct:  916 MMKNILGHAFYQLIVIFILVFAGEKFFDIDSGRKAPLHSPPSQHYTIVFNTFVLMQLFNEINSRKIHGEKNVFSGIYRNIIFCSVVLGTFICQIFIVEFGGKPFSCTSLSLSQWLWCLFIG 1036          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B1_RABIT (Plasma membrane calcium-transporting ATPase 1 OS=Oryctolagus cuniculus GN=ATP2B1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.228e-17
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ V+  L   G++  +++S  NA  H+   ++ T++FN FVL Q+FNE NARK   E+N+F GI  N +F  IV  T V+QI+I+QF GK  S + L+ + W+ S+ +G
Sbjct:  928 MMKNILGHAFYQLVVVFTLLLAGEKFFDIDSGRNAPLHAPPSEHYTIVFNIFVLMQLFNEINARKIHGERNVFEGIFNNAIFCTIVLGTFVVQIIIVQFAGKPFSCSELSVEQWLWSIFLG 1048          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B2_RAT (Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus GN=Atp2b2 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  951 MMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1071          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B2_MOUSE (Plasma membrane calcium-transporting ATPase 2 OS=Mus musculus GN=Atp2b2 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  906 MMKNILGHAVYQLTLIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1026          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B2_HUMAN (Plasma membrane calcium-transporting ATPase 2 OS=Homo sapiens GN=ATP2B2 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.062e-16
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ++++  L F G+++  ++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S + L    W+  + IG
Sbjct:  951 MMKNILGHAVYQLALIFTLLFVGEKMFQIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCIFIG 1071          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: ATC1_DICDI (Calcium-transporting ATPase PAT1 OS=Dictyostelium discoideum GN=patA PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.812e-16
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = -3
Query:  436 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN-----TLIFNSFVLCQIFNEFNARKPDEK-NIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIGFISWPLAILGKLIPV 831
            MW+N++ QA+ Q+++L  + +QG  I        AH   +KN     TL+FN FV  Q+FNE NAR    + N F     N +F+ ++  TL +QI+ + F G   ST  L    WI  VV+G IS P+ +L + IP+
Sbjct:  833 MWKNIIGQAALQLAILFTILYQGHNIFQ-HFVPQAHGPIIKNGLHHYTLVFNCFVFLQLFNEINARVLGSRTNPFKNFFNNPIFIAVMIFTLGVQIIFVTFGGSATSTDSLYIVEWICCVVVGAISLPVGLLLRKIPI 969          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B2_OREMO (Plasma membrane calcium-transporting ATPase 2 (Fragment) OS=Oreochromis mossambicus GN=atp2b2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.091e-16
Identity = 50/121 (41.32%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L    YQ+ ++  L F G++I +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI +N +F  IV  T  +QI+I+QF GK  S   L+ + W+  V +G
Sbjct:  934 MTKNILGHGVYQLIIIFTLLFVGEQIFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVFGTFAVQIVIVQFGGKPFSCQPLDLEKWMWCVFLG 1054          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B4_RAT (Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus GN=Atp2b4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.037e-16
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNAHSNKVKN---TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ+ ++ +L F G ++ +++S   A  N   +   T++FN+FVL Q+FNE N+RK   EKN+F G+ +N +F  +V  T   QILI++  GK  S T L  + W+  + IG
Sbjct:  916 MMKNILGHAVYQLGIVFLLVFAGDKLFDIDSGRKAPLNSPPSQHYTIVFNTFVLMQLFNEINSRKIHGEKNVFAGVYRNIIFCSVVLGTFFCQILIVEVGGKPFSCTNLTMEQWMWCLFIG 1036          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B3_RAT (Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus GN=Atp2b3 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.273e-16
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ++++  L F G+   +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI  N +F  IV  T  +QI+I+QF GK  S + L+ + W+  + +G
Sbjct:  925 MMKNILGHAVYQLTIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVG 1045          
BLAST of CX070063 vs. ExPASy Swiss-Prot
Match: AT2B3_HUMAN (Plasma membrane calcium-transporting ATPase 3 OS=Homo sapiens GN=ATP2B3 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 5.273e-16
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = -3
Query:  481 MWRNLLIQASYQVSVLLVLNFQGKRILNLESDSNA--HSNKVKN-TLIFNSFVLCQIFNEFNARK-PDEKNIFGGITKNRLFMGIVAVTLVLQILIIQFLGKFASTTRLNWKHWIISVVIG 831
            M +N+L  A YQ++++  L F G+   +++S  NA  HS   ++ T+IFN+FV+ Q+FNE NARK   E+N+F GI  N +F  IV  T  +QI+I+QF GK  S + L+ + W+  + +G
Sbjct:  925 MMKNILGHAVYQLAIIFTLLFVGELFFDIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCTIVLGTFGIQIVIVQFGGKPFSCSPLSTEQWLWCLFVG 1045          
The following BLAST results are available for this feature:
BLAST of CX070063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
AT2B4_HUMAN6.228e-1740.50Plasma membrane calcium-transporting ATPase 4 OS=H... [more]
AT2B1_RABIT6.228e-1741.32Plasma membrane calcium-transporting ATPase 1 OS=O... [more]
AT2B2_RAT1.062e-1641.32Plasma membrane calcium-transporting ATPase 2 OS=R... [more]
AT2B2_MOUSE1.062e-1641.32Plasma membrane calcium-transporting ATPase 2 OS=M... [more]
AT2B2_HUMAN1.062e-1641.32Plasma membrane calcium-transporting ATPase 2 OS=H... [more]
ATC1_DICDI1.812e-1636.96Calcium-transporting ATPase PAT1 OS=Dictyostelium ... [more]
AT2B2_OREMO3.091e-1641.32Plasma membrane calcium-transporting ATPase 2 (Fra... [more]
AT2B4_RAT4.037e-1638.02Plasma membrane calcium-transporting ATPase 4 OS=R... [more]
AT2B3_RAT5.273e-1640.50Plasma membrane calcium-transporting ATPase 3 OS=R... [more]
AT2B3_HUMAN5.273e-1640.50Plasma membrane calcium-transporting ATPase 3 OS=H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14E09_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14E09-I18-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070063 ID=CX070063; Name=CX070063; organism=Citrus sinensis; type=EST; length=836bp
GAATTAGGGTACCGCGGCCCCCCCTTTTTTTTTTTTTGCCTAACACATCA
TCAAGAAAGATGAGCTGCACACAAGTTCCAAAAACGTAATATCTGACATC
GTAGCTGTGCAAAATATAGCTTGTGTATTGTTAAGCCAGTTAATTGGAAA
ACATCTCTATGAACATAGATCTCTCCTTCAACTATCCTTGTTAGTCAAAA
ATCGAATTTTCCTATTCATATTGAATTCATATGTATCTTCAAATCTGTGG
ATTTTTTTTTTTTTTTATCCTGTCAACCAAAAAAGGACAGCACATTCTAC
AAAAGCCTGAAATATTGACAAACCAAGTGATCCAGATGAATCCGGGCACC
TTCCCATTGGTTAACTTTCCTAATTTCTTTGTTGAGAACGTCTTCTTTTG
AATACATTGAAAATATTACTGAAGGGAGTTGCTGGCACAGGTATCAATTT
CCCCAGAATAGCGAGGGGCCAACTGATGAAGCCAATGACGACGGAAATAA
TCCAGTGCTTCCAATTAAGCCTGGTAGTTGATGCAAACTTCCCAAGAAAC
TGAATGATAAGTATCTGAAGTACAAGAGTTACTGCCACTATCCCCATAAA
AAGACGGTTCTTAGTAATTCCTCCGAAAATATTTTTTTCATCAGGCTTCC
GAGCATTAAATTCATTAAAGATCTGGCAAAGGACAAAAGAATTGAATATC
AGAGTATTTTTTACTTTGTTGGAATGGGCATTGGAATCACTCTCCAGGTT
CAGAATCCTCTTCCCTTGAAAATTCAGGACAAGCAGGACACTTACTTGGT
AGGAAGCCTGTATTAAGAGATTCCTCCACATTATAT
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