CX070056

Overview
NameCX070056
Unique NameCX070056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.171e-49
Identity = 109/218 (50.00%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKMEEVD 836
            V+YM++ IDEY V QLKEFEGK LVS T                         LCK++KD+L               SPCC+VT  YGWTANMERI+KAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED    D        +MPPLE    D + S+MEEVD
Sbjct:  519 VIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLE---GDDDTSRMEEVD 733          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_MOUSE (Heat shock protein HSP 90-beta OS=Mus musculus GN=Hsp90ab1 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48
Identity = 106/218 (48.62%), Postives = 135/218 (61.93%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEED-------AGDADADMPPLEDAADDAEGSKMEEVD 836
            V+YM++ IDEY V QLKE++GK LVS T                         LCK++KD+L               SPCC+VT  YGWTANMERIMK+QALRDNS  GYM++KK +EINP +PI+E LR++A+ADKNDK+VKD          L+SGF+LDDP T  NRI+RM+KLGL I++D       +  A+ DMP LE    D + S+MEEVD
Sbjct:  511 VIYMIEPIDEYCVQQLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDILDKKIEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAEADKNDKAVKDLVILLFETALLSSGFTLDDPQTHANRIYRMIKLGLGIDDDDSVVEEISQPAEEDMPVLE---GDDDTSRMEEVD 725          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.063e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEEVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_MACFA (Heat shock protein HSP 90-beta OS=Macaca fascicularis GN=Hsp90ab1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.063e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_HUMAN (Heat shock protein HSP 90-beta OS=Homo sapiens GN=HSP90AB1 PE=1 SV=4)

HSP 1 Score: 192.2 bits (487), Expect = 3.063e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 3.063e-48
Identity = 107/218 (49.08%), Postives = 134/218 (61.47%), Query Frame = -1
Query:  204 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADA-------DMPPLEDAADDAEGSKMEEVD 836
            V+YM + IDEY V QLKEF+GK LVS T                         LCK++K++L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PI+E LR++A+ADKNDK+VKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   A+        ++PPLE    D + S+MEEVD
Sbjct:  510 VVYMTEPIDEYCVQQLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPLE---GDEDASRMEEVD 724          
BLAST of CX070056 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.000e-48
Identity = 108/215 (50.23%), Postives = 132/215 (61.40%), Query Frame = -1
Query:  213 VLYMVDAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXLCKVIKDVLGXXXXXXXXXXXXXXSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDAD-------ADMPPLEDAADDAEGSKME 836
            V+YM++ IDEY V QLKEFEGK LVS T                         LCK++KD+L               SPCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDKSVKD          L+SGFSL+DP T  NRI+RM+KLGL I+ED   AD        +MPPLE    D + S+ME
Sbjct:  508 VIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLE---GDDDTSRME 719          
The following BLAST results are available for this feature:
BLAST of CX070056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
HS90A_CRIGR6.171e-4950.00Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HS90B_RAT2.345e-4849.08Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_MOUSE2.345e-4849.08Heat shock protein HSP 90-beta OS=Mus musculus GN=... [more]
HS90B_BOVIN2.345e-4849.08Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
H90A1_DANRE2.345e-4848.62Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90B_PONAB3.063e-4849.08Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]
HS90B_MACFA3.063e-4849.08Heat shock protein HSP 90-beta OS=Macaca fascicula... [more]
HS90B_HUMAN3.063e-4849.08Heat shock protein HSP 90-beta OS=Homo sapiens GN=... [more]
HS90B_HORSE3.063e-4849.08Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90A_HORSE4.000e-4850.23Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14E05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14E05-I10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070056 ID=CX070056; Name=CX070056; organism=Citrus sinensis; type=EST; length=836bp
CTTTTTTTTTTGATTCGGAAACAGCATACTTTTTAAGCATTTGCAAAACA
ATAAAACAAAACCTCCACCAAAGAGGGAAAATAAAAATATAAAAGCACTA
CTCCCACAGTACTACCACCACAGAACGCATAACAAAAAGAAACTACCTAG
TTAAAAGAGTTTCATGAAAAAAGACTACTATAGCAGACTATTATAGCTTC
TTAATCAACTTCCTCCATCTTGCTGCCCTCAGCATCGTCAGCAGCATCCT
CCAATGGTGGCATGTCAGCATCAGCATCACCAGCATCCTCCTCGATGCTC
AGCCCGAGTTTCAACATCCTGTGGATTCTGTTGCCGAAAGTGTTAGGGTC
ATCAAGGCTGAAACCAGAAGTGAGGAGAGCAGTCTCAAAGAGCAGAAGGA
CAAGGTCCTTCACAGACTTGTCATTCTTGTCAGCATCAGCCCTCTTCCTG
AGCTCCTCCATGATGGGGTTCTCCGGATTGATCTCCATGGTCTTCTTGCT
GGACATGTAACCAGCCATGCTGTTGTCTCTCAAGGCCTGAGCCTTCATGA
TCCTCTCCATGTTGGCTGTCCATCCATACTCACCAGTCACCAAACAGCAG
GGTGAGTCAACAACACGGTCAGACACCACAACCTTCTCGACCTTGTCACC
CAAAACATCCTTGATCACCTTGCAGAGACCCTCAAATTTCTCCTTCAAGG
TTTCCTTCTTCTTCTTCTCATCTTCACTCTCGTCAAGCTTGAGACCTTCT
TTGGTTGCTGAGACAAGCTTCTTTCCCTCAAACTCCTTGAGCTGACCAAC
AGCGTACTCATCTATGGCATCAACCATGTAGAGCAC
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