CX070047

Overview
NameCX070047
Unique NameCX070047
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.708e-21
Identity = 61/186 (32.80%), Postives = 95/186 (51.08%), Query Frame = 1
Query:   10 KQMVASKGLEAVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFY 567
            K++V +  L+  +S V    W  T F    P  N   + +      +++ +F+ +++K+                   K   Y      F    + YPPCP+P+L  G   HTD G + +L QDD + GLQ+L  + WVDVPP   S+V+N+GD L++++N KY SV HR I+   G+RMSI  F+
Sbjct:  130 KKVVYTSNLDLYKSSVPAASWRDTIFCYMAP--NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKD--YMDCFHLF-CSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDD-MGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFF 309          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.079e-20
Identity = 71/233 (30.47%), Postives = 112/233 (48.07%), Query Frame = 1
Query:   37 EAVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKE 705
            EAVQ      DW    T+F   +   + +  PD  + +R   + ++ EL  +A                   K             V+ YP CP+P+L  GL+ HTD G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +RMSIA+F NP  +A +YP        A++E+    +++Y + +  D     A LK  AKE
Sbjct:  123 EAVQ------DWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVI---VNYYPKCPQPNLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIE--MATLKKLAKE 343          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.840e-20
Identity = 56/151 (37.09%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  289 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFE 717
            V+ YP CP+PDL  GL+ HTD G I LL QD +V GLQ  +D    W+ V P++ + V+NLGD    ++NG++K+  H+ +  +  +R+SIA+F NP  +A +YP        A++E     +++Y + + +D     A LK  AKE + +
Sbjct:  200 VNFYPQCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLE--LARLKKLAKEQQLQ 347          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  298 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 672
            YPPCP+P+   G   H D   + +L QDD V GL++L D +W  V P+  ++VIN+GD    ++NG+YKS LHR +      R S+A F  P  D V+ P P+     A   Q YP F + D M+
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.403e-20
Identity = 50/125 (40.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  298 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 672
            YPPCP+P+   G   H D   + +L QDD V GL++L D +W  V P+  ++VIN+GD    ++NG+YKS LHR +      R S+A F  P  D V+ P P+     A   Q YP F + D M+
Sbjct:  234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS-----AATPQHYPDFTWADLMR 352          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.354e-20
Identity = 57/213 (26.76%), Postives = 97/213 (45.54%), Query Frame = 1
Query:   64 LDWESTFFLRHLPVSNM----------AEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 672
            L W+ T   +  P   +           ++ D  +D+ K  +E+A  +  ++                  K+ F  S       +++ YP C +P+L  G   H D   + +L QD +V GLQ+  D++W  +PP  H+ V+N+GD    +TNG+YKS LHR +  +E  R + A F  P  + V+ P   LV       + YP F +  +++
Sbjct:  146 LPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIF---RLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLE 354          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20
Identity = 53/154 (34.42%), Postives = 89/154 (57.79%), Query Frame = 1
Query:  289 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP------APALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMK 726
            ++ YP CP+PDL  G+R HTD G I +L QD  V GLQ  +D    W+ V P++ + V+NLGD    ++NG++++  H+ +  +  +R+SIA+F NP  +A++YP        A++++    +++Y K + +      A  K  AKE R +  K
Sbjct:  200 INYYPTCPQPDLTLGVRRHTDPGTITILLQD-MVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTKHIE--VATRKKLAKEKRLQDEK 350          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.657e-19
Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = 1
Query:  286 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNMETIVNLGPI 759
            ++++YPPC  PDL  G   H D   + +L QD  V+GLQ+  D+QW  + P   + V+N+GD    ++NG +KS LHR +   E  R S+A F  P  D V+ P   ++EK  + ++ YP F +  +++ +    ++A     ++  N   I N  PI
Sbjct:  226 RLNHYPPCQTPDLTLGTGPHCDPSSLTILHQD-HVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEK--MKTRKYPDFTWSMFLE-FTQKHYRADVNTLDSFSNW-VITNNNPI 378          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.470e-19
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 1
Query:  289 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDD--QWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYP 597
            V+ YP CP+PDL  GL+ HTD G I LL QD  V GLQ  +D    W+ V P+  + V+NLGD    ++NG++K+  H+ +   E +R+SIA+F NP  DA ++P
Sbjct:  202 VNFYPRCPQPDLTLGLKRHTDPGTITLLLQD-LVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWP 305          
BLAST of CX070047 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.532e-19
Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 1
Query:  286 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 672
            +++ YPPC KPDL  G   H D   + +L QD  V+GLQ+  ++QW  + P   + V+N+GD    ++N +YKS LHR +  +E  R S+A F  P  D V+ P   L+  +++ S+ YP F +  +++
Sbjct:  228 RLNYYPPCIKPDLTLGTGPHCDPTSLTILHQD-HVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELL--DSITSRRYPDFTWSMFLE 353          
The following BLAST results are available for this feature:
BLAST of CX070047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ACCH3_SOLLC3.708e-2132.801-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_PETCR1.079e-2030.47Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_VITVI1.840e-2037.09Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX2_ORYSJ2.403e-2040.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI2.403e-2040.00Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
GAOX3_ARATH5.354e-2026.76Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
FNSI_PETCR9.133e-2034.42Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
GAOX2_ARATH2.657e-1932.91Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FL3H_HORVU3.470e-1944.76Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
GAOX1_ARATH4.532e-1935.66Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14D11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14D11-G22-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070047 ID=CX070047; Name=CX070047; organism=Citrus sinensis; type=EST; length=780bp
CAAAGATTCAAGCAAATGGTGGCAAGCAAGGGCCTTGAAGCTGTTCAGTC
CGAAGTTAATGATTTGGACTGGGAAAGCACTTTCTTCTTGCGCCACCTTC
CTGTTTCAAACATGGCTGAAATCCCCGATCTTGAAGATGATTACAGGAAG
GCAATGAAGGAATTTGCCGTTGAATTGGAGAAGGTTGCTGAGCAACTTCT
GGAATTGTTGTGTGAGAATCTTGGGCTGGAGGAAGGGTATTTGAAGAAAG
TGTTTTATGGGTCCAAAGGACCAACCTTTGGCACCAAGGTCAGCAATTAC
CCTCCATGCCCAAAACCAGATCTGATCAAGGGACTTAGGGCCCATACTGA
TGCTGGTGGCATCATCTTGCTCTTTCAAGATGACGAAGTCAGTGGCCTCC
AGCTGCTCAAAGATGACCAATGGGTTGATGTTCCACCCATGAAACACTCC
ATTGTCATCAACCTCGGTGACCAACTTGAGGTGATAACCAATGGCAAGTA
CAAGAGTGTGCTACATCGCGTGATTGCTCAAACAGAGGGTAACAGGATGT
CCATAGCATCATTTTACAATCCAGGCAGTGATGCTGTGATCTACCCGGCA
CCAGCATTGGTGGAGAAGGAGGCTGTGAACAGCCAAGTTTATCCGAAATT
TGTGTTCGAGGATTACATGAAACTCTATGCTGGGCTGAAGTTTCAGGCCA
AGGAGCCAAGGTTTGAAGCCATGAAGAACATGGAGACCATTGTGAATCTG
GGTCCTATTGCAACTGTTTGAGTTCCCCTA
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