CX070018

Overview
NameCX070018
Unique NameCX070018
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1402..1908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 7.562e-16
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  + CS + SLP + FTI G  + L+P  YIL+    D   C SGF  +DV    G LWILGDVF+  Y+TVFD +N +VG A  A
Sbjct:  302 GEMVISCSSIDSLPDIVFTINGVQYPLSPSAYILQ----DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 385          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.685e-15
Identity = 43/88 (48.86%), Postives = 52/88 (59.09%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  V CS +SSLP + FTI G  + + P  YIL+        CISGF  +DV    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQ----SQGSCISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.200e-15
Identity = 43/88 (48.86%), Postives = 51/88 (57.95%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  V CS +SSLP + FTI G  + L P  YIL+        C SGF  +DV    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.200e-15
Identity = 43/88 (48.86%), Postives = 51/88 (57.95%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  V CS +SSLP + FTI G  + L P  YIL+        C SGF  +DV    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  V CS +++LP + FTI G  + L P  Y+L+  +G    C SGF  +D+    G LWILGDVF+  Y TVFD  N +VG A  A
Sbjct:  303 GEMVVSCSAINTLPNIVFTINGVQYPLPPSAYVLQSQQG----CTSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRGNNQVGLAPVA 386          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15
Identity = 42/88 (47.73%), Postives = 51/88 (57.95%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            GE  V CS +SSLP + FTI G  + + P  YIL+        C SGF  +DV    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  305 GEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQ----SQGSCTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.361e-15
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = -1
Query:  193 SPM-GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 462
            +PM GE AV+C  L+ +P V+F I G  + L+   Y L         C SGF  LD+ PP GPLWILGDVF+  +++VFD  + RVG A A
Sbjct:  304 TPMDGEYAVECENLNIMPDVTFVINGVPYTLSATAYTLPDFVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRQFYSVFDRGSNRVGLAPA 394          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.863e-14
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            G+  V CS +SSLP + FTI G  + + P  YIL+  EG    CISGF  +++    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  305 GDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQ-SEGS---CISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.433e-14
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            G+ AV CS + +LP + FTI G  + L    YIL+  EG    C SGF  +D+    G LWILGDVF+  Y TVFD +N +VG A  A
Sbjct:  304 GQMAVSCSSIKNLPDIVFTINGIQYPLPASAYILQSQEG----CSSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRANNQVGLAPVA 387          
BLAST of CX070018 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 4.149e-14
Identity = 40/88 (45.45%), Postives = 49/88 (55.68%), Query Frame = -1
Query:  190 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 453
            G+  V CS + SLP + FTI G  + L    YIL+    +   C SGF  +D+  P G LWILGDVF+  Y  VFD  N RVG A  A
Sbjct:  304 GQMVVSCSSIQSLPDIVFTINGIQYPLPASAYILQ----NQQDCTSGFQGMDIPTPSGELWILGDVFIRQYFAVFDRGNNRVGLAPVA 387          
The following BLAST results are available for this feature:
BLAST of CX070018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PEPA_PIG7.562e-1647.73Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA2_MACFU1.685e-1548.86Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_MACMU2.200e-1548.86Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA4_MACFU2.200e-1548.86Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPA_RHIFE6.402e-1545.45Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA1_MACFU6.402e-1547.73Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CATE_RABIT8.361e-1546.15Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]
PEPA_HUMAN1.863e-1447.73Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPA_SORUN2.433e-1446.59Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA_SUNMU4.149e-1445.45Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C08-E16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070018 ID=CX070018; Name=CX070018; organism=Citrus sinensis; type=EST; length=507bp
GCCCCCCCTTTAATAGTCCAGGCACGGATTTATAAACAAAGTCCAACGTC
TTGGGCTTCTCAACAGCTGTCATACATCAGAGCATTTACATAGAACAGTT
ATTTAAGGTTTAGTTTCAACATCTTAAAGAAACAACTGAAATTCCACGAG
GTACGGTTCACTGAGCATAATTTAAAACAAACTTATTTACGCGGCTTCAG
CAAATCCCACTCTCATGTTGCTGTAGTCAAAGACTGTGTGGTAGGGACCC
ATAAAAACATCCCCCAAGATCCATAGAGGTCCACGTGGTGGGGCAACATC
TAGAGCTGAGAATCCACTTATACATTGAGCTGCATCTCCCTCGCCCACTT
TGAGGATGTACTGATCAGGAGTAAGGTCAAATATCTTTCCACCAATCGTA
AAGGAAACAATAGGCAAGGAAGACAATCTGCTACAGTCAACAGCCGATTC
TCCCATAGGACTAGGCAACCGATCACAGAGCTCATTGACATAGTTAAGAA
TGCGCCT
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