CX070010

Overview
NameCX070010
Unique NameCX070010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: PATS1_DICDI (Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.855e-29
Identity = 78/209 (37.32%), Postives = 119/209 (56.94%), Query Frame = -2
Query:  231 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLM---NENG--VVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEH-QPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRL 833
            N+VQ  G C  P  L IVTE++  G++Y +LHK +        L+VA+D+S GM +LH +   IIHRDLK+ N+L+   NEN   + KV DFG++ +Q  + +         W+APE++   +  + + DV++FG++LWELVT K  + ++  +      V  G RP IP     +   L+  CWQ D S RP FSEI + L  +A+ +
Sbjct: 2314 NIVQLKGLCLDP--LCIVTEYLPHGNLYSFLHKPEMEFSWLFRLKVALDISSGMAFLHSSTPPIIHRDLKSPNILLASINENAQTIAKVVDFGLSGLQ--HTITNRGVENPLWLAPEILNKTKEASTQTDVYAFGVILWELVTRKDYFGEIGFMTLIEEKVINGERPKIPEDCPEMYSKLIVECWQTDASQRPKFSEIEDRLIKIAEAM 2518          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_CHICK (Proto-oncogene tyrosine-protein kinase Src OS=Gallus gallus GN=SRC PE=1 SV=4)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 77/199 (38.69%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW++DP  RP F  +   L+
Sbjct:  322 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 517          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_AVIST (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain S2) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 77/199 (38.69%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW++DP  RP F  +   L+
Sbjct:  322 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 517          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_AVIS2 (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain PR2257) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 77/199 (38.69%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW++DP  RP F  +   L+
Sbjct:  322 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLE 517          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC2_XENLA (Tyrosine-protein kinase Src-2 OS=Xenopus laevis GN=src-B PE=2 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 77/199 (38.69%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW++DP  RP F  +   L+
Sbjct:  321 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGRYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPDCPESLHDLMFQCWRKDPEERPTFEYLQAFLE 516          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 76/210 (36.19%), Postives = 125/210 (59.52%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVI---EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E   VK+ DFG+A V++++ G    E  TG+  WMAPEVI   ++ P++ ++DV+S+GIVL+EL+TG+LPY  +      + +V +G        L    P     ++ D +++  +  P L P      ELLQH
Sbjct:  404 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSRLYKNCPKAMKRLVADCVKKVKEERP-LFPQILSSIELLQH 611          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: RAF1_PONAB (RAF proto-oncogene serine/threonine-protein kinase OS=Pongo abelii GN=RAF1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 76/210 (36.19%), Postives = 125/210 (59.52%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVI---EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E   VK+ DFG+A V++++ G    E  TG+  WMAPEVI   ++ P++ ++DV+S+GIVL+EL+TG+LPY  +      + +V +G        L    P     ++ D +++  +  P L P      ELLQH
Sbjct:  404 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP-LFPQILSSIELLQH 611          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 76/210 (36.19%), Postives = 125/210 (59.52%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVI---EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E   VK+ DFG+A V++++ G    E  TG+  WMAPEVI   ++ P++ ++DV+S+GIVL+EL+TG+LPY  +      + +V +G        L    P     ++ D +++  +  P L P      ELLQH
Sbjct:  404 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP-LFPQILSSIELLQH 611          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 76/210 (36.19%), Postives = 125/210 (59.52%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVI---EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E   VK+ DFG+A V++++ G    E  TG+  WMAPEVI   ++ P++ ++DV+S+GIVL+EL+TG+LPY  +      + +V +G        L    P     ++ D +++  +  P L P      ELLQH
Sbjct:  404 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP-LFPQILSSIELLQH 611          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: 7TMK1_DICDI (Seven transmembrane domain-containing tyrosine-protein kinase 1 OS=Dictyostelium discoideum GN=7tmk1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.423e-29
Identity = 78/204 (38.24%), Postives = 120/204 (58.82%), Query Frame = -2
Query:  249 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLL--RVAIDVSKGMNYLHR---NNIIHRDLKAANLLMNEN-GVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPI---LVDLLERCWQRDPSLRPDFSEITELLQ 833
            NV+QF+G C+      IVTE+M GGS+   L  +   +K   +L   +AI +++GM YLH    N I+HRDL   N+L++E+  + KVADFG+++ Q     MT+  G   + APEV   + Y  +ADV+SFG+++W ++TG+ P  +L PL+ A     +  RP +P    P+   L  L+E CW++ P  RP FS I + L+
Sbjct:  423 NVLQFLGVCSETNLNGIVTEYMGGGSLDRLLTDRYFLIKQNPILAWNMAISIARGMFYLHDWKPNPILHRDLSTKNILLDESLTIAKVADFGLSKEQGFE--MTSTVGHLCYQAPEVFIGELYTPKADVYSFGLLVWCIITGEQPNQNLQPLKMAHLAAYENYRPPMPQPMDPMWENLGKLIEMCWKKSPEERPSFSFILDFLE 624          
The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PATS1_DICDI1.855e-2937.32Probable serine/threonine-protein kinase pats1 OS=... [more]
SRC_CHICK2.423e-2938.69Proto-oncogene tyrosine-protein kinase Src OS=Gall... [more]
SRC_AVIST2.423e-2938.69Tyrosine-protein kinase transforming protein Src O... [more]
SRC_AVIS22.423e-2938.69Tyrosine-protein kinase transforming protein Src O... [more]
SRC2_XENLA2.423e-2938.69Tyrosine-protein kinase Src-2 OS=Xenopus laevis GN... [more]
RAF1_RAT2.423e-2936.19RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_PONAB2.423e-2936.19RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_HUMAN2.423e-2936.19RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN2.423e-2936.19RAF proto-oncogene serine/threonine-protein kinase... [more]
7TMK1_DICDI2.423e-2938.24Seven transmembrane domain-containing tyrosine-pro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C04-E8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTGACACAAGCATCCAGTATCATTACTTTTAGCCTATACAAATCT
TATATAAGAAAACAAAAACTCCCGTCAGACAAATTTTCCTTCCTTAGCAA
CAGAAAAAAGCATCATATACTCCGATTCTATGAACTATACTTCACTTTCT
TGTTACCCCAGGAGCTGTCTTGCTAAATACTATTACCGCTCTTCAATAGC
ATTTCCTTGTGCTAGTCCTCTCTTTGTCTGCAACCTTTGGGCCAAGTGCT
GTAGAAGTTCTGTAATTTCAGAGAAATCAGGTCTCAAAGATGGGTCTCGT
TGCCAGCATCTCTCAAGCAAATCCACTAGTATAGGATGAGTATGCACAGG
AATCGTAGGCCTAAGACCCTTCTGAACCACTCCAACTGCAGCTTGTAATG
GGGTCAAATCATCATATGGAAGCTTTCCTGTAACAAGCTCCCATAGCACA
ATCCCGAAACTGAAAACATCGGCTCTGTGATTATATGGTTGGTGTTCAAT
TACCTCTGGAGCCATCCAACGGTACGTTCCAGTTTCCGCGGTCATCACAC
CATATTGAGCTTGAACTCTGGCAACACCAAAATCAGCAACCTTGACAACT
CCATTCTCATTCATCAAAAGATTGGCCGCTTTCAGGTCCCTATGGATTAT
ATTGTTTCTGTGCAAGTAATTCATTCCCTTGGAAACATCAATGGCAACTC
TGAGTAGCAAAGGAAGCTTTAAACCGCACTTTTGTTTATGCAGGTAGTCA
TAGATGCTTCCACCAGACATAAATTCAGTCACAATGAACAGCCTTGGAGG
TCTAGTACATGCACCAATGAATTGAACGACATTC
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