CX070010

Overview
NameCX070010
Unique NameCX070010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29
Identity = 73/219 (33.33%), Postives = 115/219 (52.51%), Query Frame = -2
Query:  225 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC---------------GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQT 833
            N++  +GAC     L++  E+   G++ D+L K +                 L    LL  A DV++GM+YL +   IHRDL A N+L+ EN V K+ADFG++R Q  Y   T      RWMA E + +  Y   +DV+S+G++LWE+V+ G  PY  +T  +    + Q G R   P++    + DL+ +CW+  P  RP F++I   L  + +  +T
Sbjct:  885 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 1102          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: ROCO5_DICDI (Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum GN=roco5 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29
Identity = 72/204 (35.29%), Postives = 111/204 (54.41%), Query Frame = -2
Query:  264 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLM----NENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAV-----GVVQKGLRPTIPVHT---HPILVDLLERCWQRDPSLRPDFSEI 833
            ++V   G C  P    IV E++  G++Y +L K    +   L L++AI+++  + ++H     I HRDLK+ N+LM    N   V KV+DFG  R      +   +     W++PE++    Y  +ADV+SFGIVLWE++TG LP+D+     ++        +  GLRPTIP ++   HP  + L+  CWQ DP  RP F +I
Sbjct: 2235 SIVSLKGYCLDP--CCIVMEYIPNGTLYSHLRKSFSSITWQLKLKIAINIADAIKHMHGFTPKICHRDLKSPNILMLSDMNAAVVCKVSDFGETRAVVTSALGRDKLSNPIWLSPEIMRGDEYTEKADVYSFGIVLWEILTGLLPFDEYPVAHSSFMYQLEDEITNGLRPTIPQNSVCGHPDFITLITDCWQNDPLKRPTFIDI 2436          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: FYN_XIPHE (Proto-oncogene tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 9.207e-29
Identity = 75/198 (37.88%), Postives = 117/198 (59.09%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+MS GS+ D+L   +   LKLP L+ +A  V+ GM Y+ R N IHRDL++AN+L+ +N V K+ADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L ELVT G++PY  +   +  +  V++G R   P      L +L+ +CW++DP  RP F  +   L+
Sbjct:  326 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPASLHELMLQCWKKDPEERPTFEYLQAFLE 521          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: Y9865_DICDI (Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28
Identity = 73/202 (36.14%), Postives = 118/202 (58.42%), Query Frame = -2
Query:  231 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR-VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRL 833
            N+++FIG   +   LF+VTE ++GG + + L   K  +   L +++A D+++GM YLH   I+HRDLK+ NLL+  N  +K+ DFG A+ +  Q  +     GT  +M+PEVI    Y++ AD++SFG+VL EL+T +   D+  P Q    +  + L+  IP       ++L  +C   DP+ RP F++I + L  LA +L
Sbjct:   74 NIIRFIGIGEKDSLLFLVTELINGGDLGNILLDHKFHIPWSLRVKIAKDIAEGMEYLHSKQIMHRDLKSNNLLLGRNWTIKICDFGFAKEITIQNPLSMTICGTDEFMSPEVILGIQYSYSADIYSFGMVLLELIT-RSKLDERLP-QNNFDIDYEELQNKIPSECPREFLELSMKCCNYDPNDRPSFTDIVQTLDQLAIKL 273          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: TIE2_MOUSE (Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28
Identity = 72/219 (32.88%), Postives = 115/219 (52.51%), Query Frame = -2
Query:  225 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC---------------GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQT 833
            N++  +GAC     L++  E+   G++ D+L K +                 L    LL  A DV++GM+YL +   IHRDL A N+L+ EN + K+ADFG++R Q  Y   T      RWMA E + +  Y   +DV+S+G++LWE+V+ G  PY  +T  +    + Q G R   P++    + DL+ +CW+  P  RP F++I   L  + +  +T
Sbjct:  882 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYIAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 1099          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_RSVSA (Tyrosine-protein kinase transforming protein Src OS=Avian leukosis virus RSA GN=V-SRC PE=1 SV=5)

HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28
Identity = 77/191 (40.31%), Postives = 115/191 (60.21%), Query Frame = -2
Query:  273 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDF 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW+RDP  RP F
Sbjct:  322 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMGNGE-VLDRVERGYRMPCPPECPESLHDLMCQCWRRDPEERPTF 509          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_AVISR (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain rASV1441) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28
Identity = 77/191 (40.31%), Postives = 115/191 (60.21%), Query Frame = -2
Query:  273 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDF 830
            +VQ     +  P ++IVTE+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW+RDP  RP F
Sbjct:  322 LVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMGNGE-VLDRVERGYRMPCPPECPESLHDLMCQCWRRDPEERPTF 509          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: EPHA3_DANRE (Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.202e-28
Identity = 75/221 (33.94%), Postives = 121/221 (54.75%), Query Frame = -2
Query:  189 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV-----QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQTKRGLAQGNAIEE 833
            N+++  G  TR   + IVTE+M  GS+  +L K      +  LL +   ++ GM YL   N +HRDL A N+L+N N V KV+DFG++RV     +A Y     +    RW APE I ++ +   +DV+S+GIV+WE+++ G+ PY +++  Q  +  V +G R   P+    +L  L+  CW+++ S RP F +I   L  L +   + + LA     E+
Sbjct:  686 NIIRLEGVVTRCKPVMIVTEYMENGSLDTFLKKHDGQFTVIQLLGMLRGIAAGMQYLSEMNYVHRDLAARNILVNRNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTAPEAITYRKFTSASDVWSYGIVMWEVISYGERPYWEMSN-QDVIKAVDEGYRLPAPMDCPVVLHQLMLDCWEKNRSDRPKFGQIVNTLDRLIRNPSSLKQLANSAVWED 904          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: YES_CANFA (Proto-oncogene tyrosine-protein kinase Yes OS=Canis familiaris GN=YES1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.570e-28
Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = -2
Query:  249 LFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 791
            ++IVTEFMS GS+ D+L K+  G  LKLP L+ +A  ++ GM Y+ R N IHRDL+AAN+L+ EN V K+ADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+  EL T G++PY  +   +  +  V++G R   P      L +L+  CW++DP  RP F  I   L+
Sbjct:  340 IYIVTEFMSKGSLLDFL-KEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELTTKGRVPYPGMVN-REVLEQVERGYRMPCPQGCPESLHELMNLCWKKDPDERPTFEYIQSFLE 523          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.570e-28
Identity = 76/210 (36.19%), Postives = 123/210 (58.57%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVIEHQ---PYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++E   VK+ DFG+A V++++ G    E  TG+  WMAPEVI  Q   P++ ++DV+S+GIVL+EL+ G+LPY  +      + +V +G        L    P     ++ D +++  +  P L P      ELLQH
Sbjct:   79 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDDNPFSFQSDVYSYGIVLYELMAGELPYAHINNRDQIIFMVGRGYASPDLSRLYKNCPKAIKRLVADCVKKVKEERP-LFPQILSSIELLQH 286          
The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TIE2_BOVIN9.207e-2933.33Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
ROCO5_DICDI9.207e-2935.29Probable serine/threonine-protein kinase roco5 OS=... [more]
FYN_XIPHE9.207e-2937.88Proto-oncogene tyrosine-protein kinase Fyn OS=Xiph... [more]
Y9865_DICDI1.202e-2836.14Probable serine/threonine-protein kinase DDB_G0280... [more]
TIE2_MOUSE1.202e-2832.88Angiopoietin-1 receptor OS=Mus musculus GN=Tek PE=... [more]
SRC_RSVSA1.202e-2840.31Tyrosine-protein kinase transforming protein Src O... [more]
SRC_AVISR1.202e-2840.31Tyrosine-protein kinase transforming protein Src O... [more]
EPHA3_DANRE1.202e-2833.94Ephrin type-A receptor 3 OS=Danio rerio GN=epha3 P... [more]
YES_CANFA1.570e-2840.32Proto-oncogene tyrosine-protein kinase Yes OS=Cani... [more]
RAF_MSV361.570e-2836.19Serine/threonine-protein kinase-transforming prote... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C04-E8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTGACACAAGCATCCAGTATCATTACTTTTAGCCTATACAAATCT
TATATAAGAAAACAAAAACTCCCGTCAGACAAATTTTCCTTCCTTAGCAA
CAGAAAAAAGCATCATATACTCCGATTCTATGAACTATACTTCACTTTCT
TGTTACCCCAGGAGCTGTCTTGCTAAATACTATTACCGCTCTTCAATAGC
ATTTCCTTGTGCTAGTCCTCTCTTTGTCTGCAACCTTTGGGCCAAGTGCT
GTAGAAGTTCTGTAATTTCAGAGAAATCAGGTCTCAAAGATGGGTCTCGT
TGCCAGCATCTCTCAAGCAAATCCACTAGTATAGGATGAGTATGCACAGG
AATCGTAGGCCTAAGACCCTTCTGAACCACTCCAACTGCAGCTTGTAATG
GGGTCAAATCATCATATGGAAGCTTTCCTGTAACAAGCTCCCATAGCACA
ATCCCGAAACTGAAAACATCGGCTCTGTGATTATATGGTTGGTGTTCAAT
TACCTCTGGAGCCATCCAACGGTACGTTCCAGTTTCCGCGGTCATCACAC
CATATTGAGCTTGAACTCTGGCAACACCAAAATCAGCAACCTTGACAACT
CCATTCTCATTCATCAAAAGATTGGCCGCTTTCAGGTCCCTATGGATTAT
ATTGTTTCTGTGCAAGTAATTCATTCCCTTGGAAACATCAATGGCAACTC
TGAGTAGCAAAGGAAGCTTTAAACCGCACTTTTGTTTATGCAGGTAGTCA
TAGATGCTTCCACCAGACATAAATTCAGTCACAATGAACAGCCTTGGAGG
TCTAGTACATGCACCAATGAATTGAACGACATTC
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