CX070010

Overview
NameCX070010
Unique NameCX070010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_RSVP (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Prague C) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 75/191 (39.27%), Postives = 114/191 (59.69%), Query Frame = -2
Query:  273 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDF 830
            +VQ     +  P ++IV E+MS GS+ D+L K + G  L+LP L+ +A  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW++DP  RP F
Sbjct:  322 LVQLYAVVSEEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 509          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_MOUSE (Neuronal proto-oncogene tyrosine-protein kinase Src OS=Mus musculus GN=Src PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 74/199 (37.19%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+M+ GS+ D+L K + G  L+LP L+ ++  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW+++P  RP F  +   L+
Sbjct:  330 LVQLYAVVSEEP-IYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 525          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.499e-28
Identity = 76/210 (36.19%), Postives = 122/210 (58.10%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQY-GVMTAE--TGTYRWMAPEVIEHQ---PYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG--------LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N++ F+G  T+   L IVT++  G S+Y +LH Q+   ++  L+ +A   ++GM+YLH  NIIHRD+K+ N+ ++    VK+ DFG+A V++++ G    E  TG+  WMAPEVI  Q   P++ ++DV+S+GIVL+EL+TG+LPY  +      + +V +G        L    P     ++ D L++  +  P L P       LLQH
Sbjct:  137 NILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHGGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERP-LFPQILSSIALLQH 344          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: YES_XENLA (Tyrosine-protein kinase Yes OS=Xenopus laevis GN=yes1 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 73/186 (39.25%), Postives = 112/186 (60.22%), Query Frame = -2
Query:  249 LFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 791
            ++IVTE+M  GS+ D+L K+  G  LKLP L+ +A  ++ GM Y+ R N IHRDL+AAN+L+ +N V K+ADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L ELV  G++PY  +   +  +  V++G R   P      L +L++ CW++DP  RP F  I   L+
Sbjct:  338 IYIVTEYMIKGSLLDFL-KEGNGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVAKGRVPYPGMVN-REVLEQVERGYRMPCPQRCPESLHELMKLCWKKDPDERPTFEYIQSFLE 521          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: Y1199_DICDI (Probable serine/threonine-protein kinase DDB_G0282895 OS=Dictyostelium discoideum GN=DDB_G0282895 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 70/199 (35.18%), Postives = 115/199 (57.79%), Query Frame = -2
Query:  252 NVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPL-QAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELL 833
            N+++  GAC  P        IVTE M  G++ + ++K K  L L  +++ A+ V++G+ YLH  + IHRD+KAAN+L+++N   KV DFG++RV      MTA  GT +W +PE +  + Y   +DV+S+G++L+EL TG  P+ ++  + + A  V  K L+P I       +  L++ C    P  RP  ++I + L
Sbjct: 1432 NLLKLKGACIAPRSHKSTFMIVTELMHKGTLLEVINKNK-PLSLEDIIKYALSVAQGLAYLHSVDFIHRDIKAANILVDKNNNAKVGDFGLSRVIDNNFNMTAVAGTPKWESPECLMGEAYTSASDVYSYGMMLFELATGDEPFLEIQSIVELARSVCDKKLKPKISSSVPNFISSLIKDCLHNSPKKRPTMNQIIQKL 1629          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: Y0019_DICDI (Probable serine/threonine-protein kinase DDB_G0278521 OS=Dictyostelium discoideum GN=DDB_G0278521 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 68/215 (31.63%), Postives = 116/215 (53.95%), Query Frame = -2
Query:  243 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-----------------LKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAET-GTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHL 827
            V+    C     L +V EF   GS+Y  L+    G                   LP +  ++++++ GMNYLH  +  IIHRDL + N+L++ NG+ K+ADFG++R +   G  T  + G  R+ +PEV + Q Y+ + DVF FG++L+E+ T ++P+ D   + A+  +     RP +P        +L++ CW ++P+ RP F +I  ++Q+L
Sbjct:  595 VKLYATCIEEKELLLVLEFCDNGSLYTILNTIPIGGAGANNNNNNNNNNDIIQSLPSINTLSLNIANGMNYLHSLKPQIIHRDLTSQNILIDRNGIAKIADFGISRFKNDIGDKTMTSIGNPRFRSPEVTKGQKYSEKVDVFGFGMILYEMFTRRVPFHDYEQIAASFKIA-NAERPPLPQTIDHRWSNLIQICWDQNPNNRPSFDQILTIIQNL 808          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: SRC_RAT (Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus GN=Src PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 74/199 (37.19%), Postives = 118/199 (59.30%), Query Frame = -2
Query:  249 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV--QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 830
            +VQ     +  P ++IVTE+M+ GS+ D+L K + G  L+LP L+ ++  ++ GM Y+ R N +HRDL+AAN+L+ EN V KVADFG+AR+    +Y          +W APE   +  +  ++DV+SFGI+L EL T G++PY  +   +  +  V++G R   P      L DL+ +CW+++P  RP F  +   L+
Sbjct:  325 LVQLYAVVSEEP-IYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIASGMAYVDRMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 520          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 74/217 (34.10%), Postives = 117/217 (53.92%), Query Frame = -2
Query:  201 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV-----QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQTKRGLAQGN 833
            N++   G  T+   + IVTE+M  GS+  +L K      +  L+ +   +S GM YL     +HRDL A N+L+N N V KV+DFG++RV     +A Y     +    RW APE I  + +   +DV+S+GIV+WE+V+ G+ PY ++T  Q  +  V++G R   P+     L  L+  CWQ++ + RP F EI  +L  L +   + + L   +
Sbjct:  735 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRNPSSLKTLVNAS 949          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.569e-28
Identity = 73/218 (33.49%), Postives = 118/218 (54.13%), Query Frame = -2
Query:  198 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV-----QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQTKRGLAQGNA 833
            N++   G  T+   + IVTE+M  GS+  +L K      +  L+ +   ++ GM YL     +HRDL A N+L+N N V KV+DFG++RV     +A Y     +    RW APE I  + +   +DV+S+GIV+WE+++ G+ PY ++T  Q  +  V++G R   P+     L  L+  CWQ+D + RP F EI  +L  L +   + + L   ++
Sbjct:  711 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKDRNSRPKFDEIVSMLDKLIRNPSSLKTLVNASS 926          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: Y0133_DICDI (Probable serine/threonine-protein kinase DDB_G0278665 OS=Dictyostelium discoideum GN=DDB_G0278665 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.968e-28
Identity = 76/209 (36.36%), Postives = 114/209 (54.55%), Query Frame = -2
Query:  231 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-----NENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLP---YDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRL 833
            N+V F+G C  P  L  V E++ GGS+  YLH         L L++A D++KGM +LHRN I+H DLK  N L+          +K+ADFG+A   ++        G++ +M+PEV   + ++  ADV+S+G  L E++T K P   YD L  L+ A  V ++GL P IP      L  ++E C+ RD + RP+F  I + L  +   L
Sbjct:  245 NIVHFVGFCVSPKCL--VLEYIEGGSLDKYLHNPNYTFSPQLRLKMANDIAKGMCFLHRNEILHLDLKPQNFLVVSISPEAPVSIKLADFGLATSSSRSFYGPTVEGSFLYMSPEVFTQKKFSRAADVWSYGACLIEILTNKRPYQEYDQLGYLELA-RVREEGLPPMIPPEIEGDLRKIIEACFHRDHTKRPNFENIEQFLDAMTDSL 450          
The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRC_RSVP3.499e-2839.27Tyrosine-protein kinase transforming protein Src O... [more]
SRC_MOUSE3.499e-2837.19Neuronal proto-oncogene tyrosine-protein kinase Sr... [more]
MIL_AVIMH3.499e-2836.19Serine/threonine-protein kinase-transforming prote... [more]
YES_XENLA4.569e-2839.25Tyrosine-protein kinase Yes OS=Xenopus laevis GN=y... [more]
Y1199_DICDI4.569e-2835.18Probable serine/threonine-protein kinase DDB_G0282... [more]
Y0019_DICDI4.569e-2831.63Probable serine/threonine-protein kinase DDB_G0278... [more]
SRC_RAT4.569e-2837.19Proto-oncogene tyrosine-protein kinase Src OS=Ratt... [more]
EPHA5_HUMAN4.569e-2834.10Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
EPHA5_CHICK4.569e-2833.49Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]
Y0133_DICDI5.968e-2836.36Probable serine/threonine-protein kinase DDB_G0278... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C04-E8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTGACACAAGCATCCAGTATCATTACTTTTAGCCTATACAAATCT
TATATAAGAAAACAAAAACTCCCGTCAGACAAATTTTCCTTCCTTAGCAA
CAGAAAAAAGCATCATATACTCCGATTCTATGAACTATACTTCACTTTCT
TGTTACCCCAGGAGCTGTCTTGCTAAATACTATTACCGCTCTTCAATAGC
ATTTCCTTGTGCTAGTCCTCTCTTTGTCTGCAACCTTTGGGCCAAGTGCT
GTAGAAGTTCTGTAATTTCAGAGAAATCAGGTCTCAAAGATGGGTCTCGT
TGCCAGCATCTCTCAAGCAAATCCACTAGTATAGGATGAGTATGCACAGG
AATCGTAGGCCTAAGACCCTTCTGAACCACTCCAACTGCAGCTTGTAATG
GGGTCAAATCATCATATGGAAGCTTTCCTGTAACAAGCTCCCATAGCACA
ATCCCGAAACTGAAAACATCGGCTCTGTGATTATATGGTTGGTGTTCAAT
TACCTCTGGAGCCATCCAACGGTACGTTCCAGTTTCCGCGGTCATCACAC
CATATTGAGCTTGAACTCTGGCAACACCAAAATCAGCAACCTTGACAACT
CCATTCTCATTCATCAAAAGATTGGCCGCTTTCAGGTCCCTATGGATTAT
ATTGTTTCTGTGCAAGTAATTCATTCCCTTGGAAACATCAATGGCAACTC
TGAGTAGCAAAGGAAGCTTTAAACCGCACTTTTGTTTATGCAGGTAGTCA
TAGATGCTTCCACCAGACATAAATTCAGTCACAATGAACAGCCTTGGAGG
TCTAGTACATGCACCAATGAATTGAACGACATTC
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