CX070010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: NTRK2_CHICK (BDNF/NT-3 growth factors receptor OS=Gallus gallus GN=NTRK2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 72/218 (33.03%), Postives = 110/218 (50.46%), Query Frame = -2 Query: 237 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------------KQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGL--RP-TIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQ 833 ++V+F G C L +V E+M G + +L + L +L +A ++ GM YL + +HRDL N L+ EN +VK+ DFG++R Y V RWM PE I ++ + +DV+S G+VLWE+ T GK P+ L+ + + Q + RP T P + DL+ CWQR+P +R + EI LLQ+LA+ Sbjct: 595 HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVY----DLMLGCWQREPHMRLNIKEIHSLLQNLAK 808
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_PIG (Mast/stem cell growth factor receptor OS=Sus scrofa GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 753 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 921
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_HUMAN (Mast/stem cell growth factor receptor OS=Homo sapiens GN=KIT PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 757 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 925
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_FELCA (Mast/stem cell growth factor receptor OS=Felis catus GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 758 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 926
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_CHICK (Mast/stem cell growth factor receptor OS=Gallus gallus GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 92/169 (54.44%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVA---RVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 L + L + LL + V+KGM++L N IHRDL A N+L+ + K+ DFG+A R + Y V +WMAPE I + Y +DV+S+GI+LWEL + G PY + ++++G R P + P + D+++ CW DP RP F +I +L++ Sbjct: 742 LEDDELALDVEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWELFSLGSSPYPGMPVDSKFYKMIKEGYRMFSPECSPPEMYDIMKSCWDADPLQRPTFKQIVQLIE 910
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_CAPHI (Mast/stem cell growth factor receptor OS=Capra hircus GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 759 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 927
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_CANFA (Mast/stem cell growth factor receptor OS=Canis familiaris GN=KIT PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 760 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 928
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_CALJA (Mast/stem cell growth factor receptor OS=Callithrix jacchus GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 753 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 921
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_BOVIN (Mast/stem cell growth factor receptor OS=Bos taurus GN=KIT PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = -2 Query: 249 LHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 743 + + L L LL + V+KGM +L N IHRDL A N+L+ + K+ DFG+AR + Y V +WMAPE I + Y +DV+S+GI LWEL + G PY + ++++G R P H + D+++ CW DP RP F +I +L++ Sbjct: 758 MEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 926
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIN16_CAEEL (Receptor-like tyrosine-protein kinase kin-16 OS=Caenorhabditis elegans GN=kin-16 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23 Identity = 60/171 (35.09%), Postives = 90/171 (52.63%), Query Frame = -2 Query: 258 DYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETG-----TYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITE 749 DY+ K+ L LL + ++ GM YL ++HRDL N+L+ +N +++ADFG+AR + RWM+PE + + ++DV+SFGI L+E+ T G+LPY D+ P + + G R P H H L DL++ CW P LRP+FS E Sbjct: 283 DYVIKESLDSLTTSDLLSFGLQIANGMQYLASIPMVHRDLALRNVLLKKNKTIRIADFGMARTHENKSYYIPQKTKDAPVPVRWMSPEAFDTMKFTEKSDVWSFGICLYEIFTLGQLPYPDV-PSERIYEYMHSGRRCPQPQHCHVELYDLMKLCWHEKPELRPNFSNCVE 452 The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bpback to top |