CX070010

Overview
NameCX070010
Unique NameCX070010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: ARKA_DICDI (Ankyrin repeat-containing protein kinase A OS=Dictyostelium discoideum GN=arkA PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.860e-23
Identity = 66/193 (34.20%), Postives = 101/193 (52.33%), Query Frame = -2
Query:  267 PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNENGVVKVADFGVAR--VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELV------TGKLPYDDLTPLQAAVGVV------QKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSE 797
            P++ +V E+ S GSIY  + K     +          +  G+N LH++   ++HRD+K  N L+N N  VKVADFG++R   ++    +    GT  + APEV E + YN R+D++S GIV+WE+V         +PY +   +  A  V       ++ LRPTIP+    +L DL+   W  D S RP  +E
Sbjct: 1178 PKICLVMEYCSNGSIYHSIRKNPPSWER--FFSFVQQMLAGINALHQSTPQVLHRDIKTLNFLVNHNNKVKVADFGLSRFNTESNQETLNKTRGTSVYCAPEVFEGKEYNERSDMYSMGIVMWEIVYCVVYGCYMIPYQEYNKMFNAFQVALLVNSSKRVLRPTIPIGVPQVLKDLIYCLWDHDVSSRPTATE 1368          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: STK4_SQUAC (Serine/threonine-protein kinase 3/4 OS=Squalus acanthias GN=STK4 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.288e-22
Identity = 69/199 (34.67%), Postives = 105/199 (52.76%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVA-RVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTI--PVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            +VV++ G+  +   L+IV E+   GS+ D +  +   L    +  +     KG+ YLH    IHRD+KA N+L+N  G  K+ADFGVA ++           GT  WMAPEVI+   YN  AD++S GI   E+  GK PY D+ P++ A+ ++     PT   P        D +++C  ++P  R   +  T+LLQH
Sbjct:   86 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDLIRIRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGISAIEMAEGKPPYADIHPMR-AIFMIPTNPPPTFRKPELWTDEFTDFVKQCLVKNPEQR---AAATQLLQH 280          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: STK3_HUMAN (Serine/threonine-protein kinase 3 OS=Homo sapiens GN=STK3 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.288e-22
Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = -2
Query:  246 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVA-RVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTI--PVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 830
            VV++ G+  +   L+IV E+   GS+ D +  +   L    +  +     KG+ YLH    IHRD+KA N+L+N  G  K+ADFGVA ++           GT  WMAPEVI+   YN  AD++S GI   E+  GK PY D+ P++ A+ ++     PT   P        D +++C  ++P  R   +  T+LLQH
Sbjct:   82 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMR-AIFMIPTNPPPTFRKPELWSDDFTDFVKKCLVKNPEQR---ATATQLLQH 275          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: ROR2_DROME (Tyrosine-protein kinase transmembrane receptor Ror2 OS=Drosophila melanogaster GN=Nrk PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.288e-22
Identity = 68/212 (32.08%), Postives = 113/212 (53.30%), Query Frame = -2
Query:  246 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYL--------HKQKCGLKLPL----LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKL-PYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQH 833
            N+V+ +G C     + ++ E+M+ G + ++L        H+     +L L    LL++A +++ GM YL     +HRDL   N L+NE+  VK+ADFG++    +Q  Y     +    RWM  E I +  ++  +DV+++GI LWE+ +  L PY  LT  +  +  +++G     P +T   +  L+ RCW R PS RP F+EI   +QH
Sbjct:  503 NIVRLLGVCALGRPMCLLFEYMAPGDLSEFLRACSPYATHQAPTQDRLQLNELHLLQMAANIAAGMLYLSERKFVHRDLATRNCLINEHMAVKIADFGLSHKIYLQDYYKGDENDFIPIRWMPLESILYNKFSLESDVWAYGICLWEVFSFALQPYFGLTH-EEVIKYIKEGNVLGCPDNTPLSVYALMRRCWNRKPSERPGFAEINHCIQH 713          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KIT_FSVHZ (Tyrosine-protein kinase transforming protein kit OS=Feline sarcoma virus (strain Hardy-Zuckerman 4) GN=V-KIT PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.288e-22
Identity = 59/162 (36.42%), Postives = 87/162 (53.70%), Query Frame = -2
Query:  249 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 722
            L L  LL  +  V+KGM +L   N IHRDL A N+L+    + K+ DFG+AR     + Y V        +WMAPE I +  Y   +DV+S+GI LWEL + G  PY  +        ++++G R   P H    + D+++ CW  DP  RP F +I +L++
Sbjct:  202 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 363          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: FGFR_HYDAT (Fibroblast growth factor receptor OS=Hydra attenuata GN=FGFR PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.288e-22
Identity = 65/211 (30.81%), Postives = 114/211 (54.03%), Query Frame = -2
Query:  243 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL--------KLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHL 833
            N++  +   ++  +L+IV E+   G++  +L   +  +        K+ L  L    + V++GMN+L     IHRD+ A N+L+ E  ++K+ADFG+AR    Q  Y   T      +WMA E +  + Y  ++D++SFGI+ WE+VT G  PY  +  L+    ++++G R   P++    +  L+  CW+  PS RP FS++ E L+ +
Sbjct:  537 NILNLLAVSSQQGKLYIVVEYCRHGNLRSFLKDNRPVMQANSVITKKITLYDLTSFCLQVARGMNFLASKKCIHRDIAARNVLVGEGYLMKIADFGLARDIHEQDYYRKCTDGRLPVKWMAIEALFDRVYTTQSDIWSFGILAWEIVTFGGSPYPGIA-LEKLFDLLKQGYRMERPLNCTDDMYTLMLNCWKEIPSKRPTFSQLIEDLERM 746          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: TIE1_DANRE (Tyrosine-protein kinase receptor Tie-1 (Fragment) OS=Danio rerio GN=tie1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = -2
Query:  237 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQ 707
            LL+ A DV+ GM+YL     IHRDL A N+L+ +N V K+ADFG++R +  Y   T      RWMA E + +  Y  ++DV+SFG++LWE+V+ G  PY  +T  +    + Q G R   P +    + +L+ +CW+  P  RP FS+I+  L  + +
Sbjct:    2 LLQFAADVATGMHYLSDKQFIHRDLAARNVLVGDNLVAKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRMEQPRNCDDEVYELMRQCWRDRPYERPPFSQISVQLNRMQE 158          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: PGFRB_RAT (Beta-type platelet-derived growth factor receptor OS=Rattus norvegicus GN=Pdgfrb PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 56/159 (35.22%), Postives = 90/159 (56.60%), Query Frame = -2
Query:  243 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTY---RWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHL 707
            L+  +  V+ GM +L   N +HRDL A N+L+ E  +VK+ DFG+AR   +     ++  T+   +WMAPE I +  Y   +DV+SFGI+LWE+ T G  PY +L         +++G R   P H    + +++++CW+     RP FS++  LL+ L
Sbjct:  802 LVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLERL 960          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: NTRK1_CHICK (High affinity nerve growth factor receptor (Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 70/217 (32.26%), Postives = 110/217 (50.69%), Query Frame = -2
Query:  237 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-------------QKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQ 833
            ++V+F G CT    L +V E+M  G +  +L               Q CG L L  +L++A  ++ GM YL   + +HRDL   N L+  + VVK+ DFG++R       Y V        RWM PE I ++ +   +D++SFG+VLWE+ T GK P+  L+  + A+  + +G     P      + D+++ CWQR+P  R    +I   LQ L +
Sbjct:  554 HIVKFYGVCTEGDPLIMVFEYMKHGDLNRFLRSHGPDAKILDQGQGQPCGQLTLSHMLQIATQIASGMVYLASLHFVHRDLATRNCLVGHDLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE-AIECITQGRELERPRTCPSEVYDIMQSCWQREPQQR-SIQDIHSRLQALVK 768          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 67/194 (34.54%), Postives = 106/194 (54.64%), Query Frame = -2
Query:  264 NVVQFIGACTRPPRLFIVTEFMSGGSIYD-YLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAETGTYRWMAPEVIEHQP---YNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEI 833
            N+V++ G       L+I  E ++ GS+   Y   Q     + L  R  +D   G+ YLH    IHRD+K AN+L++ NG VK+ADFG+A+V +++  + +  GT  WMAPEVI  +    Y   AD++S G  + E+ TG++PY DL P+QA    + +G  P +P          + +C + +P  RP  +E+
Sbjct:  393 NIVRYRGTAKDGSNLYIFLELVTQGSLLKLYQRYQLRDSVVSLYTRQILD---GLKYLHDKGFIHRDIKCANILVDANGAVKLADFGLAKV-SKFNDIKSCKGTPFWMAPEVINRKDSDGYGSPADIWSLGCTVLEMCTGQIPYSDLEPVQALFR-IGRGTLPEVPDTLSLDARLFILKCLKVNPEERPTAAEL 581          
The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARKA_DICDI9.860e-2334.20Ankyrin repeat-containing protein kinase A OS=Dict... [more]
STK4_SQUAC1.288e-2234.67Serine/threonine-protein kinase 3/4 OS=Squalus aca... [more]
STK3_HUMAN1.288e-2234.85Serine/threonine-protein kinase 3 OS=Homo sapiens ... [more]
ROR2_DROME1.288e-2232.08Tyrosine-protein kinase transmembrane receptor Ror... [more]
KIT_FSVHZ1.288e-2236.42Tyrosine-protein kinase transforming protein kit O... [more]
FGFR_HYDAT1.288e-2230.81Fibroblast growth factor receptor OS=Hydra attenua... [more]
TIE1_DANRE1.682e-2237.97Tyrosine-protein kinase receptor Tie-1 (Fragment) ... [more]
PGFRB_RAT1.682e-2235.22Beta-type platelet-derived growth factor receptor ... [more]
NTRK1_CHICK1.682e-2232.26High affinity nerve growth factor receptor (Fragme... [more]
M3K1_ARATH1.682e-2234.54Mitogen-activated protein kinase kinase kinase 1 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C04-E8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTGACACAAGCATCCAGTATCATTACTTTTAGCCTATACAAATCT
TATATAAGAAAACAAAAACTCCCGTCAGACAAATTTTCCTTCCTTAGCAA
CAGAAAAAAGCATCATATACTCCGATTCTATGAACTATACTTCACTTTCT
TGTTACCCCAGGAGCTGTCTTGCTAAATACTATTACCGCTCTTCAATAGC
ATTTCCTTGTGCTAGTCCTCTCTTTGTCTGCAACCTTTGGGCCAAGTGCT
GTAGAAGTTCTGTAATTTCAGAGAAATCAGGTCTCAAAGATGGGTCTCGT
TGCCAGCATCTCTCAAGCAAATCCACTAGTATAGGATGAGTATGCACAGG
AATCGTAGGCCTAAGACCCTTCTGAACCACTCCAACTGCAGCTTGTAATG
GGGTCAAATCATCATATGGAAGCTTTCCTGTAACAAGCTCCCATAGCACA
ATCCCGAAACTGAAAACATCGGCTCTGTGATTATATGGTTGGTGTTCAAT
TACCTCTGGAGCCATCCAACGGTACGTTCCAGTTTCCGCGGTCATCACAC
CATATTGAGCTTGAACTCTGGCAACACCAAAATCAGCAACCTTGACAACT
CCATTCTCATTCATCAAAAGATTGGCCGCTTTCAGGTCCCTATGGATTAT
ATTGTTTCTGTGCAAGTAATTCATTCCCTTGGAAACATCAATGGCAACTC
TGAGTAGCAAAGGAAGCTTTAAACCGCACTTTTGTTTATGCAGGTAGTCA
TAGATGCTTCCACCAGACATAAATTCAGTCACAATGAACAGCCTTGGAGG
TCTAGTACATGCACCAATGAATTGAACGACATTC
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