CX070010

Overview
NameCX070010
Unique NameCX070010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: FRAY2_DICDI (Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 66/219 (30.14%), Postives = 112/219 (51.14%), Query Frame = -2
Query:  231 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAET--GTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQK---GLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITE------------LLQHLAQRL 833
            NVV +  +      L+++ +F+S GS  D +      G +  ++  +  +  K + Y H+   IHRD+K+ N+L++ NG ++++DFGV+      G  +  T  GT  WMAPE++E   Y++  D++SFGI   EL  GK P+ +  P++  +  +Q     L             DL+E+C Q+DPS RP  S++ E            L+QH+  +L
Sbjct:  129 NVVAYHTSFVYNESLWVIMDFLSAGSCSDIMRFSFPQGFEEHVIATILKEALKAICYFHKTGRIHRDIKSGNILIDSNGNIQLSDFGVSATLIDTGETSRNTFVGTPCWMAPEIMEQVNYDYAVDIWSFGITALELARGKAPFAEYPPMKVLLLTLQNPPPSLEGDGESKWSHSFKDLVEKCLQKDPSKRPLPSKLLEHRFFKQAKKPDYLVQHILAKL 347          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: ERBB2_MOUSE (Receptor tyrosine-protein kinase erbB-2 OS=Mus musculus GN=Erbb2 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 64/204 (31.37%), Postives = 112/204 (54.90%), Query Frame = -2
Query:  237 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARV----QAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLR-PTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQ 830
            V + +G C     + +VT+ M  G + D++ + +  L    LL   + ++KGM+YL    ++HRDL A N+L+     VK+ DFG+AR+    + +Y     +    +WMA E I  + + H++DV+S+G+ +WEL+T G  PYD + P +    +++KG R P  P+ T  + + ++ +CW  D   RP F E+      +A+
Sbjct:  783 VSRLLGICLTST-VQLVTQLMPYGCLLDHVREHRGRLGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV-PIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI-PAREIPDLLEKGERLPQPPICTIDVYM-IMVKCWMIDSECRPRFRELVSEFSRMAR 982          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: TYRO3_CHICK (Tyrosine-protein kinase receptor TYRO3 OS=Gallus gallus GN=TYRO3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 66/202 (32.67%), Postives = 101/202 (50.00%), Query Frame = -2
Query:  225 RPPRLFIVTEFMSGGSIYDYLHKQKCG-----LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQRLQT 803
            R P   ++  FM  G ++ +L   + G     L L  LL+  ID++ GM YL   N IHRDL A N +++EN  V VADFG+++       Y    A     +W+A E +    Y   +DV++FG+ +WE+VT G+ PY  +   +     +  G R   P      + DL+ RCW  +P LRP F  +   L+ +  R+ T
Sbjct:  582 RLPIPMVILPFMKHGDLHAFLLMSRIGENPFNLPLQTLLKFMIDIASGMEYLSSKNFIHRDLAARNCMLDENMNVSVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNLYTTHSDVWAFGVTMWEIVTRGQTPYAGIENAE-IYNYLISGNRLKQPPECLEDVYDLMCRCWHPEPKLRPSFGVLRSQLEMIRGRMST 782          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KSR1_MOUSE (Kinase suppressor of Ras 1 OS=Mus musculus GN=Ksr1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = -2
Query:  243 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADF------GVARVQAQYGVMTAETGTYRWMAPEVI---------EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKG---LRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHL 833
            NVV F+GAC  PP L I+T F  G +++ ++   K  L +    ++A ++ KGM YLH   I+H+DLK+ N+   +NG V + DF      GV R + +   +        ++APE++         +  P++  ADV++FG V +EL     P+    P +A +  +  G    R    V     + ++L  CW  D   RP FS + ++L+ L
Sbjct:  618 NVVLFMGACMNPPHLAIITSFCKGRTLHSFVRDPKTSLDINKTRQIAQEIIKGMGYLHAKGIVHKDLKSKNVFY-DNGKVVITDFGLFGISGVVREERRENQLKLSHDWLCYLAPEIVREMIPGRDEDQLPFSKAADVYAFGTVWYELQARDWPFKH-QPAEALIWQIGSGEGVRRVLASVSLGKEVGEILSACWAFDLQERPSFSLLMDMLERL 830          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: IGF1R_RAT (Insulin-like growth factor 1 receptor OS=Rattus norvegicus GN=Igf1r PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.747e-22
Identity = 64/208 (30.77%), Postives = 111/208 (53.37%), Query Frame = -2
Query:  264 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK---------LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR--VQAQY------GVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEI 833
            +VV+ +G  ++     ++ E M+ G +  YL   +  ++         L  ++++A +++ GM YL+ N  +HRDL A N ++ E+  VK+ DFG+ R   +  Y      G++       RWM+PE ++   +   +DV+SFG+VLWE+ T  + PY  L+  Q    V++ GL    P +   +L +L+  CWQ +P +RP F EI
Sbjct: 1062 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEVENNLVLIPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-----RWMSPESLKDGVFTTHSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEI 1263          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: Y9847_DICDI (Probable serine/threonine-protein kinase DDB_G0267686 OS=Dictyostelium discoideum GN=DDB_G0267686 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 67/213 (31.46%), Postives = 111/213 (52.11%), Query Frame = -2
Query:  234 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--RNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTAET-GTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVTG------KLPYDDLTPL----QAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQR 833
            +VV F G     P++ ++ E+ S  ++Y  +H Q        + + AI++ +G+N LH  +  I+HRDLK+ NLL+++N  +KVADFG++R           T GT+ + APEV  +  +  + D+FS GI+LWEL         + P+ +   +    Q  V   +  LRPTIP +      +L+  CW+  P  RP   EI + L  + ++
Sbjct: 2004 HVVYFYGMVL-DPKICMIMEYCSNQTLYHLMHLQM-NFTWDWVFKFAIEMVRGVNCLHSWKPVIVHRDLKSLNLLVSDNWTIKVADFGLSRFATAKSASNRTTRGTFAYCAPEVF-YGIHTTKGDIFSIGIILWELAVRCIKSKYEKPFSEFKHIQYDFQILVQTSKFNLRPTIPQNCPEAFSNLISNCWESSPDNRPSCPEILDSLLDMEKK 2213          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: VGFR2_COTJA (Vascular endothelial growth factor receptor 2 OS=Coturnix coturnix japonica GN=KDR PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 59/161 (36.65%), Postives = 89/161 (55.28%), Query Frame = -2
Query:  237 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQ 707
            L+  +  V++GM +L     IHRDL A N+L+++N VVK+ DFG+AR       Y          +WMAPE I  + Y  ++DV+SFG++LWE+ + G  PY  +   +     +++G R   P +T P +   +  CW  DP  RP FSE+ E L +L Q
Sbjct:  998 LICYSFQVARGMEFLASRKCIHRDLAARNILLSDNNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGDPKQRPTFSELVEHLGNLLQ 1158          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KSR2_MOUSE (Kinase suppressor of Ras 2 OS=Mus musculus GN=Ksr2 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 65/219 (29.68%), Postives = 113/219 (51.60%), Query Frame = -2
Query:  234 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTA---------ETGTYRWMAPEVI---------EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTI-PVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQR 833
            NVV F+GAC  PP L I+T    G ++Y  +   K  L +    ++A ++ KGM YLH   I+H+DLK+ N+   +NG V + DFG+  +    GV+ A         + G    +APE+I         +  P++  +DVF+ G + +EL   + P+    P +A +  +  G++P +  +     + D+L  CW  +   RP F+++ ++L+ L +R
Sbjct:  731 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSIS---GVLQAGRRDDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 944          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KSR2_HUMAN (Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 65/219 (29.68%), Postives = 113/219 (51.60%), Query Frame = -2
Query:  234 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVARVQAQYGVMTA---------ETGTYRWMAPEVI---------EHQPYNHRADVFSFGIVLWELVTGKLPYDDLTPLQAAVGVVQKGLRPTI-PVHTHPILVDLLERCWQRDPSLRPDFSEITELLQHLAQR 833
            NVV F+GAC  PP L I+T    G ++Y  +   K  L +    ++A ++ KGM YLH   I+H+DLK+ N+   +NG V + DFG+  +    GV+ A         + G    +APE+I         +  P++  +DVF+ G + +EL   + P+    P +A +  +  G++P +  +     + D+L  CW  +   RP F+++ ++L+ L +R
Sbjct:  721 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGLFSIS---GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 934          
BLAST of CX070010 vs. ExPASy Swiss-Prot
Match: KITA_DANRE (Mast/stem cell growth factor receptor OS=Danio rerio GN=kita PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 60/168 (35.71%), Postives = 91/168 (54.17%), Query Frame = -2
Query:  249 QKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVVKVADFGVAR---VQAQYGVMTAETGTYRWMAPEVIEHQPYNHRADVFSFGIVLWELVT-GKLPYDDLTPLQAAVGVVQKGLRPTIPVHTHPILVDLLERCWQRDPSLRPDFSEITELLQ 734
            Q+ GL L    LL  +  V+KGM++L   N IHRDL A N+L+ +  V K+ DFG+AR     + Y V        +WM+PE I    Y   +DV+S+GI+LWE+ + G  PY  +        ++++G R   P  +   + D++  CW  DP  RP FS+I E ++
Sbjct:  743 QEDGLTLDTEDLLSFSYQVAKGMDFLASKNCIHRDLAARNILLTQGRVAKICDFGLARDITTDSNYVVKGNARLPVKWMSPESIFECVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMESPEFSPSEMYDIMHSCWDADPVKRPSFSKIVEKIE 910          
The following BLAST results are available for this feature:
BLAST of CX070010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FRAY2_DICDI2.869e-2230.14Serine/threonine-protein kinase fray2 OS=Dictyoste... [more]
ERBB2_MOUSE2.869e-2231.37Receptor tyrosine-protein kinase erbB-2 OS=Mus mus... [more]
TYRO3_CHICK3.747e-2232.67Tyrosine-protein kinase receptor TYRO3 OS=Gallus g... [more]
KSR1_MOUSE3.747e-2230.23Kinase suppressor of Ras 1 OS=Mus musculus GN=Ksr1... [more]
IGF1R_RAT3.747e-2230.77Insulin-like growth factor 1 receptor OS=Rattus no... [more]
Y9847_DICDI4.893e-2231.46Probable serine/threonine-protein kinase DDB_G0267... [more]
VGFR2_COTJA4.893e-2236.65Vascular endothelial growth factor receptor 2 OS=C... [more]
KSR2_MOUSE4.893e-2229.68Kinase suppressor of Ras 2 OS=Mus musculus GN=Ksr2... [more]
KSR2_HUMAN4.893e-2229.68Kinase suppressor of Ras 2 OS=Homo sapiens GN=KSR2... [more]
KITA_DANRE4.893e-2235.71Mast/stem cell growth factor receptor OS=Danio rer... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_14C04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C04-E8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070010 ID=CX070010; Name=CX070010; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTGACACAAGCATCCAGTATCATTACTTTTAGCCTATACAAATCT
TATATAAGAAAACAAAAACTCCCGTCAGACAAATTTTCCTTCCTTAGCAA
CAGAAAAAAGCATCATATACTCCGATTCTATGAACTATACTTCACTTTCT
TGTTACCCCAGGAGCTGTCTTGCTAAATACTATTACCGCTCTTCAATAGC
ATTTCCTTGTGCTAGTCCTCTCTTTGTCTGCAACCTTTGGGCCAAGTGCT
GTAGAAGTTCTGTAATTTCAGAGAAATCAGGTCTCAAAGATGGGTCTCGT
TGCCAGCATCTCTCAAGCAAATCCACTAGTATAGGATGAGTATGCACAGG
AATCGTAGGCCTAAGACCCTTCTGAACCACTCCAACTGCAGCTTGTAATG
GGGTCAAATCATCATATGGAAGCTTTCCTGTAACAAGCTCCCATAGCACA
ATCCCGAAACTGAAAACATCGGCTCTGTGATTATATGGTTGGTGTTCAAT
TACCTCTGGAGCCATCCAACGGTACGTTCCAGTTTCCGCGGTCATCACAC
CATATTGAGCTTGAACTCTGGCAACACCAAAATCAGCAACCTTGACAACT
CCATTCTCATTCATCAAAAGATTGGCCGCTTTCAGGTCCCTATGGATTAT
ATTGTTTCTGTGCAAGTAATTCATTCCCTTGGAAACATCAATGGCAACTC
TGAGTAGCAAAGGAAGCTTTAAACCGCACTTTTGTTTATGCAGGTAGTCA
TAGATGCTTCCACCAGACATAAATTCAGTCACAATGAACAGCCTTGGAGG
TCTAGTACATGCACCAATGAATTGAACGACATTC
back to top