CX070009
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.809e-12 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = -2 Query: 195 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 566 GH+++I + SPD R +AS D +I +WD +G+ + L GH + V+ +A+S + LL SGS+D T+K+WDV + L T+ LP + VY++ +S A+G K Sbjct: 370 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDV--KAQKLSTD-------------LPGHADEVYAVDWSPDGQRVASGGKDK 478
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: Y1491_SYNY3 (Uncharacterized WD repeat-containing protein sll1491 OS=Synechocystis sp. (strain PCC 6803) GN=sll1491 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 33/70 (47.14%), Postives = 55/70 (78.57%), Query Frame = -2 Query: 342 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVT 551 I ++A+SP+ R++A+ +++GTIM++DLA+G+ VT L GH V +LA+S +G+ L SG+ D TVK+WD++ Sbjct: 275 INTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDLS 344
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = -2 Query: 195 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 566 GH+++I + SPD R +AS D +I +WD +G+ + L GH + V+ +A+S + LL SGS+D T+K+WDV +K T+ LP + VY++ +S A+G K Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA--------QKLATD-------LPGHADEVYAVDWSPDGQRVASGGKDK 478
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.363e-12 Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = -2 Query: 252 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPV 566 GH I + +S DG Y SG D T+ +WDLA+G+ GHT V ++A+S + + SGS D T+KLW+ K +E T+ + ++ P S P+ Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECK-FTIQEDGHTDWVSCVRFSPNHSNPI 165
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12 Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = -2 Query: 195 ILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 551 + S+A SPDG+Y+A+G ED I +WD+A R L GH +++L +S +G L SGS D TV LWDV + L G V ++ FS AAG+L K Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG----------------VTTVMFSPDGQFIAAGSLDK 439
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = -2 Query: 195 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 566 GH+++I + SPD R +AS D +I +WD +G+ + L GH + V+ +A+S + LL SGS+D T+K+WDV + LP + VY++ +S A+G K Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAM---------------DLPGHADEVYAVDWSPDGQRVASGGKDK 478
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 4.030e-12 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = -2 Query: 195 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSK 566 GH+++I + SPD R +AS D +I +WD +G+ + L GH + V+ +A+S + LL SGS+D T+K+WDV + LP + VY++ +S A+G K Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAM---------------DLPGHADEVYAVDWSPDGQRVASGGKDK 478
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.264e-12 Identity = 39/121 (32.23%), Postives = 62/121 (51.24%), Query Frame = -2 Query: 204 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTSTKVLKTEEKSGTNRLRSLKTLPTKSTPVYSLQFSRRNLLFAAGA 566 GH I +A S D + S +D T+ +WD+ SG+C+ L GH++ V+ ++ +L+ SGS D TVK+W+V T + LKTL S PV ++ F+ L +G+ Sbjct: 81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTG---------------KCLKTLSAHSDPVSAVHFNCSGSLIVSGS 186
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: YCW2_YEAST (WD repeat-containing protein YCR072C OS=Saccharomyces cerevisiae GN=YCR072C PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = -2 Query: 339 GHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTT 566 GH+ ++ +A SPDGRY+ S D +I +WD G+ ++ GH + V+ +A+S + LL S S D T+K+WDV T Sbjct: 400 GHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRT 475
BLAST of CX070009 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.875e-12 Identity = 32/78 (41.03%), Postives = 52/78 (66.67%), Query Frame = -2 Query: 336 IGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLASGRCVTPLMGHTSCVWTLAYSCEGSLLASGSADCTVKLWDVTTS 569 +G ++ + S+AMSPDGR +A+G D + +WD +G + GH V+++A+S +G LASGS D ++KLWD++ S Sbjct: 412 VGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489 The following BLAST results are available for this feature:
BLAST of CX070009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070009 ID=CX070009; Name=CX070009; organism=Citrus sinensis; type=EST; length=582bpback to top |