CX070007

Overview
NameCX070007
Unique NameCX070007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.160e-25
Identity = 70/189 (37.04%), Postives = 99/189 (52.38%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   44 VALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.515e-25
Identity = 78/223 (34.98%), Postives = 116/223 (52.02%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+ TFLF++  V + M    S    + VG+  +A A    + A++     ISGGH+NPAVT GLLL   +S+ RA  Y + Q L +     ++    G      +G   + +A G +   G+  EII TF L++TV++   D K+ + D   P+L     GF V    LA    +G  +NPARS G A++      W DHW++WVGP IG  LA  +Y  ++I
Sbjct:   25 FITTFLFVFAGVGSAMATD-SLVGNTLVGLFAVAVAHA-FVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGG-----MGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVLI 233          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.978e-25
Identity = 76/227 (33.48%), Postives = 115/227 (50.66%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIP 676
            F+AT +F++    +V G+ K      T+G +  +A A    + A V  +   SGGH+NPAVTFG+L+ R++S  RA  Y   Q LGAV    +++   G      +      + H   +   L  E++ TF LVYTV+ +A D +    D     +APL IG       LA  P  G  +NPAR+ G A++      W  HW++W+GP IGA +A   ++ V+   P
Sbjct:   35 FVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGG-----MRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD-----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALV---GWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQP 248          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.978e-25
Identity = 75/220 (34.09%), Postives = 107/220 (48.64%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVG-------IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 640
            F  TF+FL+   + +  V+  +   +T         +  IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S  R V     Q +  +   G        K         N +  G ++  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +GA LA
Sbjct:   55 FCGTFMFLWCAYV-ICNVANHDVALTTEPEGSHPGQLIMIALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF-----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.584e-25
Identity = 69/189 (36.51%), Postives = 99/189 (52.38%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   42 VALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 221          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.584e-25
Identity = 69/189 (36.51%), Postives = 99/189 (52.38%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  Y+  Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   44 VALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FSNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.584e-25
Identity = 68/181 (37.57%), Postives = 95/181 (52.49%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA 640
            IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S TR V   V Q +  +   G        +        AN +  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W+GP +G+ LA
Sbjct:   94 IAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVL-----FANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25
Identity = 78/229 (34.06%), Postives = 116/229 (50.66%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT LF++  V + +  +K  ++      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP IG  LA  +Y  + I
Sbjct:   25 FIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIYGDVFI 237          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.408e-25
Identity = 78/229 (34.06%), Postives = 116/229 (50.66%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT LF++  V + +  +K  ++      G+  +A A    +F  V   A ISGGH+NPAVT GL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+W GP IG  LA  +Y  + I
Sbjct:   25 FIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIYGDVFI 237          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.518e-25
Identity = 73/223 (32.74%), Postives = 114/223 (51.12%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++T +F++    + +  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG+LL   ++L R + Y + Q LG+V    ++    G +     G     ++ G    + L  EI+ TF LVYTV+ +A D K  +    +  +AP+ IGF V    LA    +G  +NPA + G A++      W +HW++W GP IG  LA + +  V
Sbjct:   28 FISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFG-----LSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
The following BLAST results are available for this feature:
BLAST of CX070007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
MIP_CANFA1.160e-2537.04Lens fiber major intrinsic protein OS=Canis famili... [more]
TIP41_ARATH1.515e-2534.98Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP32_ORYSJ1.978e-2533.48Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQY2_YEAST1.978e-2534.09Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
MIP_RAT2.584e-2536.51Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE2.584e-2536.51Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQY1_YEAST2.584e-2537.57Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP2_TOBAC4.408e-2534.06Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC4.408e-2534.06Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP12_ARATH7.518e-2532.74Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070007 ID=CX070007; Name=CX070007; organism=Citrus sinensis; type=EST; length=801bp
GTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGG
GTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATT
GCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGG
TATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAG
CGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGC
CTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAA
GAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACA
CCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTT
TACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCA
TGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCC
ACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGT
CTTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTG
GATCTTCTGGGTTGGACCATTCATTGGAGCTGCACTGGCTGCTGTGTACC
ACCAGATAGTCATCAGGGCCATTCCCTTCAAGTCCAGGGCTTAAGAGAGT
TCACTGATGGACCTTTTTTTTTTTTAATTTGTATCTTCTTTGTCGTGTCT
TTTTGTTTATGTGCATTTGGTGTTTAACTGTTTAAGATGTTAATTAATTG
T
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