CX070007

Overview
NameCX070007
Unique NameCX070007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.282e-24
Identity = 64/200 (32.00%), Postives = 101/200 (50.50%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +G+ G++ AFG  +  + +    ISG H+NPAVT GL    +      V Y++ Q +G V   GV+        GF+ + +     G       GY+    L  E++ T + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G A ++  D A    W+FWV P +GA L AV ++++
Sbjct:   33 IGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 79/225 (35.11%), Postives = 116/225 (51.56%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   +FY + Q LGA     ++K     K     G        G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++WVGP IG  LA  VY  + I
Sbjct:   25 FIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG------VAGISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVYGDVFI 236          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 68/189 (35.98%), Postives = 98/189 (51.85%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +    + G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   44 VAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 69/189 (36.51%), Postives = 98/189 (51.85%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA  YM  Q LGAV GA V+  +  +    R     N +  G +       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IG  L ++ +  ++
Sbjct:   44 VALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.675e-24
Identity = 69/200 (34.50%), Postives = 101/200 (50.50%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +G  G+A AFG  +  + Y    ISG H+NPAV+ GL    +    +   Y+V Q LGA+    V+        GF+ +K +    G A     GY+    L  E++ T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FW+ P IGA L A  ++++
Sbjct:   33 IGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFAS-NGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVA-LFVGGWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.187e-24
Identity = 81/228 (35.53%), Postives = 120/228 (52.63%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAH---GYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT LF++  V + +  G   +       G+  IA A    +F  V   A ISGGH+NPAVTFGL +   +++   VFY V Q LGA   A ++ GF        +  G  +  H   G ++ +G+  E++ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++WVGP +G  LA  VY  + I
Sbjct:   25 FIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGF--------VTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FAGNWVYWVGPLVGGGLAGLVYGDVFI 236          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.857e-24
Identity = 82/225 (36.44%), Postives = 118/225 (52.44%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVM--GVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT LF++  V + +  G   +       G+  IA A    +F  V   A  SGGH+NPAVTFGL +   +++   +FY V Q LGA     +++     K     G     V+ G T+ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPARS G A+    D A   +W++WVGP IG  LA  VY  + I
Sbjct:   25 FIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHG-----VSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVA-AADFA--GNWVYWVGPLIGGGLAGLVYGDVFI 237          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24
Identity = 74/228 (32.46%), Postives = 123/228 (53.95%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGA-VCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAV FG  +   ++L R + Y++ Q LG+ VC A +V               ++V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++W GP IG  +A + ++++
Sbjct:   27 FISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24
Identity = 64/200 (32.00%), Postives = 100/200 (50.00%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +G+ G++ AFG  +  + +    ISG H+NPAVT GL    +      V Y++ Q +G V   GV+        GF+ + +     G       GY+    L  EI+   + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G A ++  D A    W+FWV P +GA L AV ++++
Sbjct:   33 IGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVTIGLWAGGRFEAKEIVPYILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.873e-24
Identity = 68/200 (34.00%), Postives = 101/200 (50.50%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGV-------VKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +G  G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y+V Q +GA+  A         V GF+   +     G  +     Y+    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ L+HL +IP+T T +NPARS G A +F    A +  W+FW+ P  GA + A+ +++V
Sbjct:   37 IGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALEQLWLFWLAPIAGALVGALAYRLV 229          
The following BLAST results are available for this feature:
BLAST of CX070007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
AQPZ_VIBVU1.282e-2432.00Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
TIP21_ORYSJ1.675e-2435.11Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
MIP_HUMAN1.675e-2435.98Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_CAVPO1.675e-2436.51Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPZ_CHRVO1.675e-2434.50Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP21_MAIZE2.187e-2435.53Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP22_MAIZE2.857e-2436.44Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP1_MEDSA3.731e-2432.46Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQPZ_VIBVY3.731e-2432.00Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ_BORPA4.873e-2434.00Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070007 ID=CX070007; Name=CX070007; organism=Citrus sinensis; type=EST; length=801bp
GTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGG
GTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATT
GCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGG
TATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAG
CGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGC
CTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAA
GAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACA
CCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTT
TACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCA
TGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCC
ACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGT
CTTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTG
GATCTTCTGGGTTGGACCATTCATTGGAGCTGCACTGGCTGCTGTGTACC
ACCAGATAGTCATCAGGGCCATTCCCTTCAAGTCCAGGGCTTAAGAGAGT
TCACTGATGGACCTTTTTTTTTTTTAATTTGTATCTTCTTTGTCGTGTCT
TTTTGTTTATGTGCATTTGGTGTTTAACTGTTTAAGATGTTAATTAATTG
T
back to top