CX070007

Overview
NameCX070007
Unique NameCX070007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8852 contig Csv1_Contig8852:247..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.535e-94
Identity = 166/228 (72.81%), Postives = 187/228 (82.02%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 685
            F+AT LFLY+TV TV+G  K    C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QCLGA+CG G VK F  +  Y  LGGGAN VA GY+KG  LGAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N + AWDD WIFWVGPF+GA  AA YHQ ++RA   K+
Sbjct:   44 FIATLLFLYVTVATVIGHKKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTP-YNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKA 270          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 3.420e-94
Identity = 171/231 (74.03%), Postives = 192/231 (83.12%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 670
            F+AT LFLYITV TV+G         + ++  CS VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V Q LGA+CG G+VKGF+ S  Y R GGGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+I+N+  AW DHWIFWVGP IGAA+AA YHQ V+RA
Sbjct:   48 FVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQ-SAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.834e-94
Identity = 171/235 (72.77%), Postives = 196/235 (83.40%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNT-------KCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 685
            F+AT LFLY+T++TV+G  KS T       +C+ VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK++L RAV YMV QCLGA+CG  +VK F+ S  + R GGGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAAII+NKD AWD HWIFWVGPF GAA+AA YHQ V+RA   K+
Sbjct:   44 FIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQ-SAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKA 276          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 9.951e-94
Identity = 168/234 (71.79%), Postives = 187/234 (79.91%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 685
            F+AT LFLY+++LTV+G       +     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVT GL LARK+SL R V Y+V QCLGA+CG G VK F+ S  Y R GGGAN +A GY KG GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N + AWDD WIFWVGP IGAA AA YHQ ++RA   K+
Sbjct:   45 FVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSY-YTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKA 277          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 2.217e-93
Identity = 164/231 (71.00%), Postives = 191/231 (82.68%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 670
            F+AT LFLY+TV TV+G        V+ ++  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVT GL LARK+SL RA+ YM  QCLGA+CG  +VKGF+ S  Y+R GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+++N + AW D WIFWVGPFIGAA+AA+YHQ+++RA
Sbjct:   45 FVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSL-YDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.895e-93
Identity = 171/231 (74.03%), Postives = 189/231 (81.82%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG--------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 670
            F+AT LFLYITV TV+G         S  +  CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM  Q LGA+CG  +VKGF+ S  Y R GGGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N   AW D WIFWVGPFIGAA+AA+YHQIV+RA
Sbjct:   47 FVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.781e-93
Identity = 166/234 (70.94%), Postives = 192/234 (82.05%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG------VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 685
            F+AT LFLY+TVLTV+G      ++     C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGL LA K+SL RAV YMV QCLGA CG G+VK F+ S  Y R GGGAN+++ GY  G G+GAEIIGTFVLVYTVFSATD KRNARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+I+N   AWDD WIFWVGPF+GAA+AA YHQ V+RA   K+
Sbjct:   44 FIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQ-STYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKA 276          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 340.502 bits (872), Expect = 6.450e-93
Identity = 168/230 (73.04%), Postives = 187/230 (81.30%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMG--VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 685
            F+AT LFLYITV TV+G  V  S  +C  VG  GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLLLARK+S+ RAV Y+V QCLG + G G+VKG      Y   GGGAN+VA GY+ G  LGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N+  AWDDHWIFW GPFIGA  AA YHQ ++RA   K+
Sbjct:   44 FIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 4.191e-84
Identity = 147/225 (65.33%), Postives = 175/225 (77.78%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTK---CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 667
            FMAT +FLY+++ TV+G          C+ VG  G+AW+FG  IF LVYCT G+SGGHINPAVT GL   RKLSL R V Y+V QCLGA+ GAG+VKG    + Y+ LGGGAN V+ GY+    LGAEI+GTF+LVYTVFSATD KR ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N+  AW DHWIFWVGP IGA LAA YH++V+R
Sbjct:   50 FMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIM-KRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.962e-77
Identity = 142/232 (61.21%), Postives = 172/232 (74.14%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII--FNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 691
            F AT L + I+V TV+G  + + +    G+ GIAWAFGG+IF LVYCTAGISGGH+NPAVTF ++LAR++SL RA  Y + QC+GAVCGAG+ +   G   Y R GGGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++       AW   WIFWVGPF GAA A +YH  ++R    K+ A
Sbjct:   41 FTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFA 271          
The following BLAST results are available for this feature:
BLAST of CX070007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
PIP27_ARATH1.535e-9472.81Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP23_ORYSJ3.420e-9474.03Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH5.834e-9472.77Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_ARATH9.951e-9471.79Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ2.217e-9371.00Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_MAIZE2.895e-9374.03Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP26_ARATH3.781e-9370.94Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP26_ORYSJ6.450e-9373.04Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ4.191e-8465.33Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ4.962e-7761.21Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070007 ID=CX070007; Name=CX070007; organism=Citrus sinensis; type=EST; length=801bp
GTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGG
GTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATT
GCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGG
TATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAG
CGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGC
CTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAA
GAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACA
CCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTT
TACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCA
TGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCC
ACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGT
CTTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTG
GATCTTCTGGGTTGGACCATTCATTGGAGCTGCACTGGCTGCTGTGTACC
ACCAGATAGTCATCAGGGCCATTCCCTTCAAGTCCAGGGCTTAAGAGAGT
TCACTGATGGACCTTTTTTTTTTTTAATTTGTATCTTCTTTGTCGTGTCT
TTTTGTTTATGTGCATTTGGTGTTTAACTGTTTAAGATGTTAATTAATTG
T
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