CX070007

Overview
NameCX070007
Unique NameCX070007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.121e-28
Identity = 72/198 (36.36%), Postives = 109/198 (55.05%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQ 655
            +G+ G+A+AFG  +  + +    ISG H+NPAV+FGL++  +      + Y++ Q +GA+  AGV+        GFE S       G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FWV P IGAA+    ++
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLAS-NGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAIGGALYR 224          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.497e-28
Identity = 81/220 (36.82%), Postives = 118/220 (53.64%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYH 652
            F++T LF++  V + +  +K  S+    T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   VFY + Q LG+     ++K   G      L    + VA G    +G+  EII TF LVYTV+ +A D K+ +    +  +APL IG  V    LA  P +G  +NPARS G A+       +  HW++WVGP IG  LA + +
Sbjct:   25 FISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.488e-28
Identity = 81/231 (35.06%), Postives = 121/231 (52.38%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVIRA 670
            F+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A +SGGH+NPAVT GL +   +++   +FY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF LVYTV+ +A D K+ +    + ++AP+ IGF V    LA  P +G  +NPARS G A+       +  +WI+W GP IG ALA  +Y  + I A
Sbjct:   25 FIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITA 239          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 84/224 (37.50%), Postives = 118/224 (52.68%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAA-VYHQIVI 664
            F+AT +F++    +V+ + K     ST G +  +A A    +   V     ISGGH+NPAVTFG L+  ++SL RAV Y V Q LGAV    +++   G     R  G A  +A G      +  E + TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++      W  HW++W+GPF+GA LA  VY  +VI
Sbjct:   32 FIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM---RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKR----GHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLVI 243          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAH----GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GA+  A V+      K   +LGG  AN        GY+    L  E++ T   +  +  +T        S VP+  AP+ IG  + L+HL +IP+T T +NPARS G A +F  D A    W+FWV P IGA +A +  +IV
Sbjct:   34 IGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 70/196 (35.71%), Postives = 106/196 (54.08%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYH 652
            +G  G++ AFG  +  + +    ISG HINPAV+ GL  A++   T  + Y+  Q LG + GAGV+    G K    L GG     +      GYT    L  E++ TF+ +  +  +TD +           AP+ IG ++ L+HL +IP+T T +NPARS G A +F  D A  + W+FW+ P +GAALA +++
Sbjct:   36 IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRRAPKG------FAPIAIGLSLTLIHLISIPVTNTSVNPARSTGPA-LFVGDWAIAELWLFWLAPIVGAALAGLFY 224          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 646
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 71/193 (36.79%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 646
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGA+  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G A +F    A    W+FWV P +GA + A+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADRAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.606e-27
Identity = 79/223 (35.43%), Postives = 119/223 (53.36%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++  +F++    + M  SK      T   G+   + A    +F  V   A ISGGH+NPAVTFG  +   +SL +AV Y V Q LG+V    ++K   G         GA  ++ G    + +  EI+ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      WD+HW++W+GPF+GAA+AA+ + I+
Sbjct:   27 FISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGG-----AAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.606e-27
Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            IA AFG ++  +V     +SG HINPAVTF  L+  ++SL RA+FY+  Q LGAV GA V+ G   +     L    N +  G + G     EI  T   V  +F+  D +RN R   V     L IGF++ L HL  +  TG  +NPARS   A++      + +HW++WVGP IG AL  + +  ++
Sbjct:   44 IALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----SLAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRN---FTNHWVYWVGPIIGGALGGLVYDFIL 223          
The following BLAST results are available for this feature:
BLAST of CX070007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
AQPZ_PSEPK1.121e-2836.36Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP21_ARATH2.497e-2836.82Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP_ANTMA9.488e-2835.06Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP31_MAIZE1.618e-2737.50Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
AQPZ1_RHIME1.618e-2736.68Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQPZ_GLOVI2.761e-2735.71Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 ... [more]
AQPZ_BRUAB2.761e-2736.79Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.761e-2736.79Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP12_ORYSJ3.606e-2735.43Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
MIP_RANPI3.606e-2737.57Lens fiber major intrinsic protein OS=Rana pipiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070007 ID=CX070007; Name=CX070007; organism=Citrus sinensis; type=EST; length=801bp
GTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGG
GTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATT
GCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGG
TATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAG
CGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGC
CTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAA
GAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACA
CCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTT
TACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCA
TGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCC
ACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGT
CTTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTG
GATCTTCTGGGTTGGACCATTCATTGGAGCTGCACTGGCTGCTGTGTACC
ACCAGATAGTCATCAGGGCCATTCCCTTCAAGTCCAGGGCTTAAGAGAGT
TCACTGATGGACCTTTTTTTTTTTTAATTTGTATCTTCTTTGTCGTGTCT
TTTTGTTTATGTGCATTTGGTGTTTAACTGTTTAAGATGTTAATTAATTG
T
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