CX070007

Overview
NameCX070007
Unique NameCX070007
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 72/227 (31.72%), Postives = 123/227 (54.19%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   ++L R + Y++ Q LG++  + ++     S          +V A G ++G G+G     EI+ TF LVYTV+ +A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++     +W +HW++W GP IG  +A + ++++
Sbjct:   27 FISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTAS----------SVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            +A AFG  +  LV     ISG H+NPAVTF  L+  ++SL RA+ Y+V Q LGAV GA V+  +  +    R     N +  G + G     EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   AI+      + +HW++WVGP IGA L ++ +  ++
Sbjct:   44 VALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRN---FTNHWVYWVGPVIGAGLGSLLYDFLL 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.052e-26
Identity = 75/198 (37.88%), Postives = 103/198 (52.02%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAH----GYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQI 658
            +G  G+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+V Q LGAV  A  +      K    +GG  AN        GY+    L  EII T   +  +  +T  +       VP+  AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FW+ P +G A+ AV  +I
Sbjct:   34 IGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQA-LFVGGWALQQLWLFWLAPILGGAIGAVVWKI 223          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 79/225 (35.11%), Postives = 120/225 (53.33%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEG--SKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++T +F++  V + +  +K          G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY + Q LGA+ GA +V+   G  +  +   G GA          +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+       + + WI+WVGP +G  LA + ++ V
Sbjct:   26 FISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 69/181 (38.12%), Postives = 101/181 (55.80%), Query Frame = 2
Query:  122 IFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            +F  V   A +SGGH+NPAVTFG  +   ++L RA+ Y + Q LGAV    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV+ +A D K+      + I+APL IG  V    L      G  +NPA S G A++      W +HW++WVGPFIGAA+AA+ +  +
Sbjct:   69 LFVAVSVGANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKK----GDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 77/230 (33.48%), Postives = 122/230 (53.04%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            F +TF+F++    + + + K   ++  S   +  +A A    +FA V  +  +SGGH+NPAV+FG L+  ++S+ RAV+Y + Q LG++  A V++               N+   G+    G+G       E++ TF L+YTV+ +A D KR A    V  +APL IG  V    L   P  G  +NPA + G +++      W  HWIFWVGP +GAALAA+ ++  +
Sbjct:   27 FASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTN-----------NMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGA----VSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLV---GWQWHQHWIFWVGPLLGAALAALVYEYAV 238          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 63/191 (32.98%), Postives = 103/191 (53.93%), Query Frame = 2
Query:   98 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVK-GFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 667
            IA+ FG  +  +      +SG HINPAVT G L+  ++S+ +A FY+++QC+GA+ GA V+K   +G    +    G +           +  E + TF+LV+ V + +D  R      +   APL +G A+   HL  I ++G  +NPARS G A++      W  HW++WVGP  G  LA + ++++ +
Sbjct:   52 IAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL---GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVV---QGVWTYHWVYWVGPIAGGLLAGIIYRLIFK 232          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.206e-26
Identity = 67/193 (34.72%), Postives = 101/193 (52.33%), Query Frame = 2
Query:   83 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLG-----GGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAV 646
            +G+ G+++AFG  +  + Y   GISGGH NPAV+ GL +A ++     V Y++ Q  GA+  A V+      K   +LG     G       GY+    L  E++ TF  +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FW+ P  GAA+A +
Sbjct:   34 IGLLGVSFAFGLTVLTMAYTVGGISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQA-LFVGGWALSQLWLFWIAPLFGAAIAGI 219          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 6.800e-26
Identity = 79/221 (35.75%), Postives = 113/221 (51.13%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 664
            F+AT L+++  V +VM         +   +  IA  F  +    V  T   SG H NPAVT   L+   +SL RAV Y+  Q +GA  GA ++ G       E L  G NVV +  + G  +  E++ T  LV  VF++TD+++ +            IG +V L HL  I  TG  +NPARS G AII  K   +  HW+FWVGP +GA LA++ +  V+
Sbjct:   31 FLATGLYVFFGVGSVM-----RWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETL--GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTSGS------PATMIGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of CX070007 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.881e-26
Identity = 76/223 (34.08%), Postives = 118/223 (52.91%), Query Frame = 2
Query:    2 FMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 661
            F++T +F++    + M  SK       +  G+   + A    +F  V   A ISGGH+NPAVTFG  +   +SL +A+ Y V Q LG+V    ++K   G         GA  ++ G    + +  E++ TF LVYTV+ +A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++WVGP  GAA+AA+ + I+
Sbjct:   27 FISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAAL-----GAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWENHWVYWVGPLAGAAIAALVYDII 237          
The following BLAST results are available for this feature:
BLAST of CX070007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
TIP1_MEDTR3.052e-2631.72Probable aquaporin TIP-type OS=Medicago truncatula... [more]
MIP_SHEEP3.052e-2637.57Lens fiber major intrinsic protein OS=Ovis aries G... [more]
AQPZ1_AGRT53.052e-2637.88Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP22_ORYSJ3.986e-2635.11Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH3.986e-2638.12Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIPA_PHAVU5.206e-2633.48Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
AQP_DROME5.206e-2632.98Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQPZ2_RHIME5.206e-2634.72Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQP6_HUMAN6.800e-2635.75Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
TIP12_MAIZE8.881e-2634.08Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070007 ID=CX070007; Name=CX070007; organism=Citrus sinensis; type=EST; length=801bp
GTTCATGGCTACCTTCTTGTTCCTCTACATCACTGTCTTGACTGTCATGG
GTGTCTCTAAGTCTAACACCAAGTGCTCCACTGTCGGTATCCAAGGAATT
GCTTGGGCCTTTGGTGGCATGATCTTTGCGCTTGTTTACTGCACTGCTGG
TATCTCAGGAGGACACATCAACCCAGCAGTGACCTTCGGTCTGCTGCTAG
CGAGGAAGCTTTCCCTGACAAGGGCTGTCTTCTACATGGTCATGCAGTGC
CTTGGTGCTGTCTGTGGTGCTGGTGTTGTCAAGGGATTCGAAGGTTCAAA
GAACTACGAGAGGTTGGGTGGTGGAGCCAATGTTGTTGCTCACGGCTACA
CCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGAACCTTTGTTCTTGTT
TACACTGTCTTCTCTGCCACTGATGCGAAGAGAAACGCCAGAGACTCTCA
TGTCCCTATTTTGGCCCCCCTCCCCATTGGATTTGCTGTTTTCTTGGTCC
ACCTGGCCACCATCCCCATCACAGGAACTGGCATCAACCCAGCTAGGAGT
CTTGGAGCTGCCATCATCTTCAACAAAGACCATGCCTGGGATGACCATTG
GATCTTCTGGGTTGGACCATTCATTGGAGCTGCACTGGCTGCTGTGTACC
ACCAGATAGTCATCAGGGCCATTCCCTTCAAGTCCAGGGCTTAAGAGAGT
TCACTGATGGACCTTTTTTTTTTTTAATTTGTATCTTCTTTGTCGTGTCT
TTTTGTTTATGTGCATTTGGTGTTTAACTGTTTAAGATGTTAATTAATTG
T
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