CX070006

Overview
NameCX070006
Unique NameCX070006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 7.714e-39
Identity = 92/219 (42.01%), Postives = 125/219 (57.08%), Query Frame = -1
Query:  205 FLYITVLTVMG----VSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IGF+V L HL  I  TG GINPARS G+A+I    H + DHW+FWVGPFIG ALA + +  ++
Sbjct:   24 FIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 93/219 (42.47%), Postives = 125/219 (57.08%), Query Frame = -1
Query:  205 FLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIGAALA + +  ++
Sbjct:   24 FIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 1.316e-38
Identity = 95/219 (43.38%), Postives = 128/219 (58.45%), Query Frame = -1
Query:  205 FLYITVLTVMGVS---KSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G     KSN     V     ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIGAALA + +  ++
Sbjct:   24 FIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 89/217 (41.01%), Postives = 123/217 (56.68%), Query Frame = -1
Query:  205 FLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG ALA + +  ++
Sbjct:   24 FVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 90/219 (41.10%), Postives = 122/219 (55.71%), Query Frame = -1
Query:  205 FLYITVLTVMGVSKSNTKCSTVGIQG----IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G +       T G       ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R           PL IG +V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIG ALA + +  ++
Sbjct:   24 FVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.481e-37
Identity = 89/217 (41.01%), Postives = 124/217 (57.14%), Query Frame = -1
Query:  205 FLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+    ++ G   S     L  G N +AHG   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG ALA + +  ++
Sbjct:   24 FVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 3.241e-37
Identity = 89/217 (41.01%), Postives = 123/217 (56.68%), Query Frame = -1
Query:  205 FLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RA+ Y++ QC+GA+    ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG ALA + +  ++
Sbjct:   24 FVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 154.066 bits (388), Expect = 9.429e-37
Identity = 88/217 (40.55%), Postives = 125/217 (57.60%), Query Frame = -1
Query:  205 FLYITVLTVMGVSKSNTKCSTVGIQGI--AWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 849
            F++I++ + +G +    +  T+    +  + AFG  I  L      ISG H+NPAVT GLLL+ ++S+ RAV Y++ QC+GA+  + ++ G   S     L  G N +A G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG+ALA + +  ++
Sbjct:   24 FVFISIGSALGFNYPLERNQTLVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRN---FSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.962e-35
Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = -1
Query:  181 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA-AVYHQIVIRAIPFKSR 771
            I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG    + HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA  +Y  +    + FK R
Sbjct:   73 ISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVEFKRR 261          
BLAST of CX070006 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.757e-35
Identity = 86/199 (43.22%), Postives = 116/199 (58.29%), Query Frame = -1
Query:  181 IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALA-AVYHQIVIRAIPFKSR 771
            I+  FG  I  +V C   ISGGHINPAVT  ++  RK+S+ ++VFY+  QCLGA+ GAG++           +GG      HG  T G GL  E+I TF LV+T+F++ D+KR    + V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA A+Y  +    +  K R
Sbjct:   73 ISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELKRR 261          
The following BLAST results are available for this feature:
BLAST of CX070006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
AQP1_PIG7.714e-3942.01Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.007e-3842.47Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.316e-3843.38Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN1.900e-3741.01Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA1.900e-3741.10Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.481e-3741.01Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_PONAB3.241e-3741.01Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_RAT9.429e-3740.55Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP4_HUMAN3.962e-3543.22Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_RAT6.757e-3543.22Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C02-E4-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070006 ID=CX070006; Name=CX070006; organism=Citrus sinensis; type=EST; length=849bp
CTTTTTTTTGAATCCTCCAATCAAAAGCTTAAAAAAAAAAAATACAGCAA
TGCTAGATAATTTACACACAATTAATTAACATCTTAAACAGTTAAACACC
AAATGCACATAAACAAAAAGACACGACAAAGAAGATACAAATTAAAAAAA
AAAAAGGTCCATCAGTGAACTCTCTTAAGCCCTGGACTTGAAGGGAATGG
CCCTGATGACTATCTGGTGGTACACAGCAGCCAGTGCAGCTCCAATGAAT
GGTCCAACCCAGAAGATCCAATGGTCATCCCAGGCATGGTCTTTGTTGAA
GATGATGGCAGCTCCAAGACTCCTAGCTGGGTTGATGCCAGTTCCTGTGA
TGGGGATGGTGGCCAGGTGGACCAAGAAAACAGCAAATCCAATGGGGAGG
GGGGCCAAAATAGGGACATGAGAGTCTCTGGCGTTTCTCTTCGCATCAGT
GGCAGAGAAGACAGTGTAAACAAGAACAAAGGTTCCAATAATCTCAGCAC
CAAGACCATCACCCTTGGTGTAGCCGTGAGCAACAACATTGGCTCCACCA
CCCAACCTCTCGTAGTTCTTTGAACCTTCGAATCCCTTGACAACACCAGC
ACCACAGACAGCACCAAGGCACTGCATGACCATGTAGAAGACAGCCCTTG
TCAGGGAAAGCTTCCTCGCTAGCAGCAGACCGAAGGTCACTGCTGGGTTG
ATGTGTCCTCCTGAGATACCAGCAGTGCAGTAAACAAGCGCAAAGATCAT
GCCACCAAAGGCCCAAGCAATTCCTTGGATACCGACAGTGGAGCACTTGG
TGTTAGACTTAGAGACACCCATGACAGTCAAGACAGTGATGTAGAGGAA
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