CX070005

Overview
NameCX070005
Unique NameCX070005
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.211e-24
Identity = 57/102 (55.88%), Postives = 63/102 (61.76%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIAISG 306
            ETPE HVFK DLPGL              LQISG+R +EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KASME+G                 +I ISG
Sbjct:   53 ETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ET EAHVFKADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+FRLPENVKMDQ+KASME+G
Sbjct:   52 ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENG 130          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ET EAHVFKADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G
Sbjct:   54 ETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.523e-24
Identity = 58/102 (56.86%), Postives = 63/102 (61.76%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIAISG 306
            ETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KASME+G                 AI ISG
Sbjct:   48 ETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASMENGVLTVTVPKAEVKKPEVKAIEISG 149          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.025e-23
Identity = 52/79 (65.82%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ETPEAHVFKADLPG+              L+ISGQR  EKE+KNDTWHRVERSSG F R+FRLPEN K+DQ+KA ME+G
Sbjct:   61 ETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENG 139          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.025e-23
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ETPEAHVFKADLPGL              LQISG+R  E E+KND WHRVERSSG F+RRFRLPEN KM++IKASME+G
Sbjct:   56 ETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENG 134          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.025e-23
Identity = 57/102 (55.88%), Postives = 62/102 (60.78%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIAISG 306
            ETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA ME+G                 AI ISG
Sbjct:   49 ETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGMENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.284e-23
Identity = 56/102 (54.90%), Postives = 62/102 (60.78%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIAISG 306
            ETPE+HVFKADLPG+              L ISGQR  EKEDKND WHRVERSSG F RRFRLPEN K+DQ+KA +E+G                 AI ISG
Sbjct:   49 ETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 150          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ET EAHV KAD+PGL              LQISG+R +EKEDKNDTWHRV+RSSG F RRFRLPEN K++Q+KA ME+G
Sbjct:   53 ETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENG 131          
BLAST of CX070005 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 8.677e-23
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1
Query:    1 ETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 237
            ETPEAHVFKAD+PGL              LQISG+R  E E+K+DTWHRVERSSG F RRFRLPEN K++++KASME+G
Sbjct:   55 ETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENG 133          
The following BLAST results are available for this feature:
BLAST of CX070005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HSP11_SOLLC1.211e-2455.8817.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HS17A_ARATH3.523e-2467.0917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HS178_ARATH3.523e-2465.8217.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS16C_ORYSJ3.523e-2456.8616.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HSP11_CHERU1.025e-2365.8218.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS17C_ARATH1.025e-2367.0917.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HS16B_ORYSJ1.025e-2355.8816.9 kDa class I heat shock protein 2 OS=Oryza sat... [more]
HS16A_ORYSJ2.284e-2354.9016.9 kDa class I heat shock protein 1 OS=Oryza sat... [more]
HSP15_SOYBN6.644e-2363.2917.6 kDa class I heat shock protein OS=Glycine max... [more]
HSP17_ARATH8.677e-2363.2917.4 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14C01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14C01-E2-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX070005 ID=CX070005; Name=CX070005; organism=Citrus sinensis; type=EST; length=425bp
GAAACCCCGGAAGCCCACGTGTTCAAGGCCGATCTTCCGGGGCTGAGGAA
AGAGGAAGTGAAGGTCGAGGTCGAAGATGACAGGGTGCTTCAGATAAGCG
GTCAGAGGAAGATTGAGAAGGAAGACAAGAACGACACGTGGCATCGCGTT
GAGCGTAGCAGTGGCATGTTCTCAAGGAGGTTCAGGCTGCCTGAGAATGT
GAAGATGGATCAGATTAAGGCTTCCATGGAGAGTGGTGTGCTCACTGTTA
CTGTTCCGAAAGTGGAGGTGACCAAACCTGATGTTAAGGCTATCGCAATC
TCTGGTTAAACCAGTGTCTGTCTGTATGTCTTTATGCATACTTGTATAAG
GATGCTGTGATGTTTTGGTTTTGTAATTTGCTTGCATGAATGTTTGTGTA
ATGGTATTCTGTTCATTTGAGCTTT
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