CX070004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/73 (61.64%), Postives = 51/73 (69.86%), Query Frame = -1 Query: 136 LQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIAISG 354 LQISG+R +EKEDKNDTWHRVERSSG F R FRLP+N K+DQ+KASME+G KAI ISG Sbjct: 2 LQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.267e-17 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 205 RETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 444 +ETPE HV D+PGL VL++SG+RK E+E K D WHRVERS G F R+FRLP+NV +D +KA +E+G Sbjct: 72 KETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENG 151
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 205 RETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 444 +ETPE HV D+PGL VL++SG+RK E++ K D WHRVERS G F R+F+LP+NV +D +KA ME+G Sbjct: 80 KETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENG 159
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.473e-15 Identity = 49/106 (46.23%), Postives = 59/106 (55.66%), Query Frame = -1 Query: 136 RETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRKIEKE--DKNDT-WHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXKAIAISG 444 +ETP AHVF ADLPG+ VL ISG+R E++ KND WH VERSSG F RRFRLP ++DQ+ ASM++G KAI ISG Sbjct: 45 KETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.925e-15 Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 205 RETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 444 +ET E H D+PGL VL++SG+RK E+E K D WHRVERS G F R+F+LP+NV M+ +KA +E+G Sbjct: 76 KETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENG 155
BLAST of CX070004 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.594e-12 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = -1 Query: 205 RETPEAHVFKADLPGLXXXXXXXXXXXXXVLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 444 +ET AHVF AD+PG+ VL+ISGQR E+K + WHRVERSS F R RLP N D + A++++G Sbjct: 75 KETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNG 154 The following BLAST results are available for this feature:
BLAST of CX070004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX070004 ID=CX070004; Name=CX070004; organism=Citrus sinensis; type=EST; length=444bpback to top |