CX069997

Overview
NameCX069997
Unique NameCX069997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCPA (Glucose-6-phosphate isomerase OS=Mycobacterium paratuberculosis GN=pgi PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.178e-42
Identity = 92/194 (47.42%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+  + GEI +GEPGTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  E     ++PHK   GNR         L    +GQL+A+YEH++  EG IWGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  356 TMESNGKSTRADGSPVTTDTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTAEGSGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPADIVPHKVMPGNRPSTSILANRLTPSVLGQLIALYEHQVFTEGVIWGIDSFDQWGVELGK---TQAKALLPVITANNSPAPQSDSSTDALVRRY 546          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCA1 (Glucose-6-phosphate isomerase OS=Mycobacterium avium (strain 104) GN=pgi PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.457e-42
Identity = 92/194 (47.42%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+  + GEI +GEPGTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  E     ++PHK   GNR         L    +GQL+A+YEH++  EG IWGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  356 TMESNGKSTRADGSPVTTDTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTAEGSGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPADIVPHKVMPGNRPSTSILANRLTPSVLGQLIALYEHQVFTEGVIWGIDSFDQWGVELGK---TQAKALLPVITADNSPAPQSDSSTDALVRRY 546          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCLE (Glucose-6-phosphate isomerase OS=Mycobacterium leprae GN=pgi PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.308e-42
Identity = 91/194 (46.91%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+    GEI +GE GTNGQH+FYQL+HQG R++P DFIG  +    +     + S HD LMSNFFAQ   LA GKT E++  E     ++PHK   GNR         L    +GQL+A+YEH++  EG IWGI+SFDQWGVELGK    Q    L        P +  + ST TL+ RY
Sbjct:  356 TMESNGKSTRADGTPVTTNTGEIYWGETGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTVDGIGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPAEVVPHKVMPGNRPTTSILANRLTPSVLGQLIALYEHQVFTEGVIWGIDSFDQWGVELGKK---QAEALLPVITGNASPAQQLDSSTDTLVRRY 546          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCLB (Glucose-6-phosphate isomerase OS=Mycobacterium leprae (strain Br4923) GN=pgi PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.308e-42
Identity = 91/194 (46.91%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+    GEI +GE GTNGQH+FYQL+HQG R++P DFIG  +    +     + S HD LMSNFFAQ   LA GKT E++  E     ++PHK   GNR         L    +GQL+A+YEH++  EG IWGI+SFDQWGVELGK    Q    L        P +  + ST TL+ RY
Sbjct:  356 TMESNGKSTRADGTPVTTNTGEIYWGETGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTVDGIGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPAEVVPHKVMPGNRPTTSILANRLTPSVLGQLIALYEHQVFTEGVIWGIDSFDQWGVELGKK---QAEALLPVITGNASPAQQLDSSTDTLVRRY 546          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_CORK4 (Glucose-6-phosphate isomerase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=pgi PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.588e-41
Identity = 90/196 (45.92%), Postives = 119/196 (60.71%), Query Frame = -3
Query:  238 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRYLE 822
            +MESNGK V IDG P+    GEI +GEPGTNGQH+F+QL+HQG +++P DFIG       +       S HD LMSNFFAQ   LA GKT +++  E V P ++PHK   GNR         L    +GQL+A+YEH +  EG IW INSFDQWGVELGK  A ++   +   +     ++  + ST +L++ Y E
Sbjct:  362 TMESNGKSVRIDGTPVTAPTGEIYWGEPGTNGQHAFFQLLHQGTQLVPADFIGFATPNDDLPTADGTGSMHDLLMSNFFAQTKVLAFGKTADEITAEGVDPSIVPHKVMPGNRPTTTILAPALTPSVLGQLIALYEHIVFTEGTIWSINSFDQWGVELGKKQAGELLPAVTGEK----GVDTGDASTDSLISWYRE 553          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI3_RHOSR (Glucose-6-phosphate isomerase 3 OS=Rhodococcus sp. (strain RHA1) GN=pgi3 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.588e-41
Identity = 83/160 (51.88%), Postives = 108/160 (67.50%), Query Frame = -3
Query:  346 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGK 822
            +MESNGK V  DG P+  + GEI +GEPGTNGQH+F+QL+HQG R++P DFIG  +S   +       S HD LM+NFFAQ   LA GKT +++  E+ +  LIPHK   GNR         L    +GQL+A+YEH++ V+G +WGI+SFDQWGVELGK
Sbjct:  355 TMESNGKSVHTDGSPVRCDTGEIFWGEPGTNGQHAFFQLLHQGTRLVPADFIGFAQSTDDLPTMSGTGSMHDLLMANFFAQSKVLAFGKTRKEIAAESASADLIPHKVMPGNRPSTTILAPRLTPSTLGQLIALYEHQVFVQGVVWGIDSFDQWGVELGK 514          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_ROSS1 (Glucose-6-phosphate isomerase OS=Roseiflexus sp. (strain RS-1) GN=pgi PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.074e-41
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK V++ G P+ ++ G I +GEPGTNGQHSFYQL+HQG R+  CDFIG  +   P+       ++HD LM+N FAQ +ALA GKT E+   E     L PH+TF+GNR         L    +G L+A+YEH +  +G IW IN FDQWGVELGK+LA ++  +L +   +  P    + ST  L+ RY
Sbjct:  351 TMESNGKSVTLSGAPVSYQTGMIYWGEPGTNGQHSFYQLLHQGTRLALCDFIGFAEPLNPLG------NHHDLLMANMFAQAEALAFGKTTEETLAEGTPEWLAPHRTFAGNRPSNTLLAERLTPATLGALVALYEHSVFTQGAIWDINPFDQWGVELGKALAGRIVPELMS---ESAPHLAHDSSTNALIRRY 535          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCTU (Glucose-6-phosphate isomerase OS=Mycobacterium tuberculosis GN=pgi PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41
Identity = 90/194 (46.39%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+  + GEI +GEPGTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  +    H++ HK   GNR         L    +GQL+A+YEH++  EG +WGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  355 TMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGK---TQAKALLPVITGAGSPPPQSDSSTDGLVRRY 545          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCTA (Glucose-6-phosphate isomerase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=pgi PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41
Identity = 90/194 (46.39%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+  + GEI +GEPGTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  +    H++ HK   GNR         L    +GQL+A+YEH++  EG +WGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  355 TMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGK---TQAKALLPVITGAGSPPPQSDSSTDGLVRRY 545          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCBT (Glucose-6-phosphate isomerase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=pgi PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41
Identity = 90/194 (46.39%), Postives = 115/194 (59.28%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG P+  + GEI +GEPGTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  +    H++ HK   GNR         L    +GQL+A+YEH++  EG +WGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  355 TMESNGKSTRADGSPVSADTGEIFWGEPGTNGQHAFYQLLHQGTRLVPADFIGFAQPLDDLPTAEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAADGTPAHVVAHKVMPGNRPSTSILASRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGK---TQAKALLPVITGAGSPPPQSDSSTDGLVRRY 545          
The following BLAST results are available for this feature:
BLAST of CX069997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
G6PI_MYCPA4.178e-4247.42Glucose-6-phosphate isomerase OS=Mycobacterium par... [more]
G6PI_MYCA15.457e-4247.42Glucose-6-phosphate isomerase OS=Mycobacterium avi... [more]
G6PI_MYCLE9.308e-4246.91Glucose-6-phosphate isomerase OS=Mycobacterium lep... [more]
G6PI_MYCLB9.308e-4246.91Glucose-6-phosphate isomerase OS=Mycobacterium lep... [more]
G6PI_CORK41.588e-4145.92Glucose-6-phosphate isomerase OS=Corynebacterium k... [more]
G6PI3_RHOSR1.588e-4151.88Glucose-6-phosphate isomerase 3 OS=Rhodococcus sp.... [more]
G6PI_ROSS12.074e-4146.39Glucose-6-phosphate isomerase OS=Roseiflexus sp. (... [more]
G6PI_MYCTU3.537e-4146.39Glucose-6-phosphate isomerase OS=Mycobacterium tub... [more]
G6PI_MYCTA3.537e-4146.39Glucose-6-phosphate isomerase OS=Mycobacterium tub... [more]
G6PI_MYCBT3.537e-4146.39Glucose-6-phosphate isomerase OS=Mycobacterium bov... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B08-C16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069997 ID=CX069997; Name=CX069997; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTTTTATTAAAGTTTAATGCATTATTAAAGTTTGATTA
CTTTACATACTATAATTCACCGGCATAACCAGTCTTCAGTAAAATTTTAT
GCAGTCTCCGCGATAATTTCAGTTAAGTTGATACATGAAGCCAGAAACAA
GAGCCAAATTGCCAGACAATTTTTAGCAGAAACCATTTATATCCGTGGAA
GAAGCGTTGAAGGATCAGATGGGATATCAGAACTTGCCTCTAGGTATCTT
GTCAGCAGTGTTGTAGTACTGAAATTAAAGCCCTCGATCGGTTCTCTTTT
CATACGAGAAGCATGAAGTTGCTTTCTAACCTGAGTAGCCAGAGACTTCC
CCAACTCAACTCCCCACTGATCGAAAGAATTGATTCCCCATATGAAACCT
TCCACAGCTATTCTGTGTTCGTAGATTGCCAACAACTGTCCAATATTGTA
AGCATTCAGTGATGGAAGCAGAAGACTGAGAGAAGGCCGATTGCCAGAGA
AAGTCTTATGAGGAATTAGATGTGGTGCAACATTCTCTTTTTGTAGCTGC
TCGGGTGTCTTCCCCACTGCAAGGGCATCTGGCTGTGCAAAAAAGTTGGA
CATGAGTTCATCATGGTTACTCACCACTTCACCTTTCAGGTAAACTGGTT
GCTGGCTCTTCACAACACCAATAAAATCACAAGGAATTACACGTCCCTGG
TGAATTAGTTGATAAAAGCTGTGCTGACCATTAGTTCCAGGTTCACCAAA
ATCAATTTCACCGGCCTCAAAGGGAAGGGGCACGCCATCAATTGACACTC
CCTTGCCATTACTCTCCATGCTAA
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