CX069997

Overview
NameCX069997
Unique NameCX069997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4321 contig Csv1_Contig4321:1..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_SPHAL (Glucose-6-phosphate isomerase OS=Sphingopyxis alaskensis GN=pgi PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = -3
Query:  337 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLA 819
            MESNGK V++DG PL   +  + +G  GT+ QH+ +QL+HQG  ++P +FI    +++P +L  +  ++H+ L++N  AQ  AL  G+  +              + + G+R         ++  ++G L+A YEHR+     + G+N FDQ+GVELGK +A
Sbjct:  332 MESNGKSVTLDGAPLAQHSAPVTWGGVGTDAQHAVFQLLHQGTHLVPVEFI---VAREPDHLLDD--AHHETLVANCIAQGAALMAGRASDDRA-----------RAYPGDRPSTTILLDQVSPRSLGALIAFYEHRVFANAVLLGVNPFDQFGVELGKEMA 477          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_ERYLH (Glucose-6-phosphate isomerase OS=Erythrobacter litoralis (strain HTCC2594) GN=pgi PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20
Identity = 60/165 (36.36%), Postives = 86/165 (52.12%), Query Frame = -3
Query:  328 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQV 819
            MESNGK V  DG P+      I +G  GT+ QH+ +QL+HQG  ++P DFI  +     +       ++H  L++N FAQ  AL  G      +K+       P + F G+R         L+A  +G L+A +EHR      + GIN FDQ+GVELGK +A  +
Sbjct:  344 MESNGKRVKADGTPVDGPTAPITWGGVGTDAQHAVFQLLHQGTHLVPVDFIASIAPGDDLD-----PAHHRILLTNCFAQGAALMAGGNMAADEKD-------PARVFPGDRPSATMLCDDLDAVTLGALIAFHEHRTFANAVLMGINPFDQFGVELGKKMAKDI 496          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_ENCCU (Probable glucose-6-phosphate isomerase OS=Encephalitozoon cuniculi GN=ECU05_0650 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.562e-17
Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = -3
Query:  316 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQL 819
            MESNGK           + G I +G  GTN QHSF+QL+HQG R +  + +  +K   P++ + E    H+ ++SN  AQ   L VGK      KE  A      ++F GNR         L    +G ++A YEH+I + G  WGINSFDQ GV LGK +AT+V + L
Sbjct:  339 MESNGKQSERG------DTGLIVWGGLGTNTQHSFFQLLHQGTRDVLVELLMPLK---PLHEEKEY---HNMVVSNCLAQSRGLMVGK------KEGSAK-----ESFRGNRPTITVCYSKLTPETLGAMIAHYEHKIFILGLYWGINSFDQPGVTLGKKIATEVLETL 484          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_IDILO (Glucose-6-phosphate isomerase OS=Idiomarina loihiensis GN=pgi PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17
Identity = 61/194 (31.44%), Postives = 90/194 (46.39%), Query Frame = -3
Query:  247 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGR-VIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGK--TPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTR 819
            MESNGK  + +   + +  G I +G  G NGQH+F+Q +HQG      DF+ V+K + P +          +   +  A+   LAV       +L  +       P   + G           L   + G L+A YEH++  +G IWG+NSFDQ GVE GK +A  V + L       E  E F+ ST  ++ R
Sbjct:  308 MESNGKQYTAENEAIDYPTGPIIWGGFGPNGQHAFFQHLHQGYDQFTADFVTVLKREAPGF---------SDATRSGLAEQQRLAVANCLAHRRLMSDGSENADSPSDHYPGGHPSNLLIMDELTPESFGALIAAYEHKVFTQGVIWGLNSFDQPGVEKGKKIAMDVLRVLDG-----ESDESFDESTDAVIQR 487          
The following BLAST results are available for this feature:
BLAST of CX069997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
G6PI_SPHAL2.635e-2033.95Glucose-6-phosphate isomerase OS=Sphingopyxis alas... [more]
G6PI_ERYLH4.495e-2036.36Glucose-6-phosphate isomerase OS=Erythrobacter lit... [more]
G6PI_ENCCU3.562e-1739.05Probable glucose-6-phosphate isomerase OS=Encephal... [more]
G6PI_IDILO6.075e-1731.44Glucose-6-phosphate isomerase OS=Idiomarina loihie... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_14B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B08-C16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069997 ID=CX069997; Name=CX069997; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTTTTATTAAAGTTTAATGCATTATTAAAGTTTGATTA
CTTTACATACTATAATTCACCGGCATAACCAGTCTTCAGTAAAATTTTAT
GCAGTCTCCGCGATAATTTCAGTTAAGTTGATACATGAAGCCAGAAACAA
GAGCCAAATTGCCAGACAATTTTTAGCAGAAACCATTTATATCCGTGGAA
GAAGCGTTGAAGGATCAGATGGGATATCAGAACTTGCCTCTAGGTATCTT
GTCAGCAGTGTTGTAGTACTGAAATTAAAGCCCTCGATCGGTTCTCTTTT
CATACGAGAAGCATGAAGTTGCTTTCTAACCTGAGTAGCCAGAGACTTCC
CCAACTCAACTCCCCACTGATCGAAAGAATTGATTCCCCATATGAAACCT
TCCACAGCTATTCTGTGTTCGTAGATTGCCAACAACTGTCCAATATTGTA
AGCATTCAGTGATGGAAGCAGAAGACTGAGAGAAGGCCGATTGCCAGAGA
AAGTCTTATGAGGAATTAGATGTGGTGCAACATTCTCTTTTTGTAGCTGC
TCGGGTGTCTTCCCCACTGCAAGGGCATCTGGCTGTGCAAAAAAGTTGGA
CATGAGTTCATCATGGTTACTCACCACTTCACCTTTCAGGTAAACTGGTT
GCTGGCTCTTCACAACACCAATAAAATCACAAGGAATTACACGTCCCTGG
TGAATTAGTTGATAAAAGCTGTGCTGACCATTAGTTCCAGGTTCACCAAA
ATCAATTTCACCGGCCTCAAAGGGAAGGGGCACGCCATCAATTGACACTC
CCTTGCCATTACTCTCCATGCTAA
back to top