CX069997

Overview
NameCX069997
Unique NameCX069997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_CHLCH (Glucose-6-phosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.108e-40
Identity = 85/180 (47.22%), Postives = 117/180 (65.00%), Query Frame = -3
Query:  307 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPH--------LIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHAS 819
            MESNGK V+ DG  + +  G + +GEPGTN QH+F+QL+HQG ++IP DFI  +K+Q P+       ++HD L SN FAQ +AL  GK+ E++++E VA          L+PHK F GNR         LN + +G L+A+YEH++ V+G +W INSFDQWGVELGK LA  +  +L AS
Sbjct:  352 MESNGKRVTRDGTVVDYATGAVIWGEPGTNSQHAFFQLLHQGTQIIPADFILPLKTQNPIG------AHHDMLASNCFAQTEALMKGKSEEEVERELVAAGADAATIAALLPHKVFPGNRPTTTLLLDELNPFTLGSLIALYEHKVFVQGIVWNINSFDQWGVELGKQLANVILPELQAS 525          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_ANASK (Glucose-6-phosphate isomerase OS=Anaeromyxobacter sp. (strain K) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.108e-40
Identity = 90/195 (46.15%), Postives = 121/195 (62.05%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEA-GEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK V+  G P+     G I +GEPGTNGQHSFYQL+HQG  ++ CDFIG  +   P++    +  +HD LM+N FAQ +ALA GKT E+ + E     L+PH+TF GNR         L    +G L+A+YEH +  +G IW ++SFDQWGVELGK LA ++ K+L +     EP    + ST  L+ RY
Sbjct:  355 TMESNGKRVTASGAPVEGHGTGAIYWGEPGTNGQHSFYQLLHQGTHLVACDFIGFCR---PLHA---LARHHDLLMANLFAQGEALAFGKTAEEARAEGTPEPLVPHRTFPGNRPSSTILADRLTPRTLGALVALYEHAVFTQGVIWDVDSFDQWGVELGKVLANRIVKELES---PAEPALAHDGSTNALIRRY 540          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_PROMH (Glucose-6-phosphate isomerase OS=Proteus mirabilis (strain HI4320) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.671e-40
Identity = 90/202 (44.55%), Postives = 123/202 (60.89%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAP--------HLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK +  DG  + ++ G I +GEPGTNGQH+FYQLIHQG ++IPCDFI    S  P+        +H +LMSNFFAQ +ALA GKT EQ+  E  +         ++ P K F GNR         +  Y++G L+A+YEH+I V+G I+ I +FDQWGVELGK LA ++  +L      +E +   + ST  L+ RY
Sbjct:  353 NMESNGKYIDRDGNKVSYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAISHNPLS------DHHAKLMSNFFAQTEALAFGKTREQVDAEFASAGKDPATMGYVAPFKVFEGNRPTNSILLKEITPYSLGALIAMYEHKIFVQGVIFNIFTFDQWGVELGKQLANRILPELKG----KESVNSHDSSTNNLINRY 544          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_BIFLO (Glucose-6-phosphate isomerase OS=Bifidobacterium longum GN=pgi PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.671e-40
Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = -3
Query:  328 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQV 822
            +MESNGK V  DG P+  E GEI +GEPGTNGQH+FYQLIHQG ++IP DFI  V +  P     + V  H+  + N+FAQ  ALA GKT ++++ E     ++P + FSGNR         L  + +G+L+A+YEH   VEG +WG++S+DQWGVELGK LA Q+
Sbjct:  372 TMESNGKSVRWDGTPVTSETGEIFWGEPGTNGQHAFYQLIHQGTQLIPADFIAFVNTPNPTKDGDQDV--HELFLGNYFAQTKALAFGKTADEVRAEGTPEEIVPARVFSGNRPTTSIFGVALTPFALGELIALYEHITFVEGTVWGLDSYDQWGVELGKQLAKQI 535          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_VIBSL (Glucose-6-phosphate isomerase OS=Vibrio splendidus (strain LGP32) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 88/178 (49.44%), Postives = 113/178 (63.48%), Query Frame = -3
Query:  316 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAP--------HLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQL 822
            +MESNGK V  +G P+ ++ G I +GEPGTNGQH+FYQLIHQG ++IP DFI    S  P         +H +LMSNFFAQ +ALA GKT E ++ E +A          L+P K F GNR         +N  ++G L+A+YEH+I V+G IW I SFDQWGVELGK LA Q+  +L
Sbjct:  354 NMESNGKFVDREGNPVEYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPSDFIAPAISHNPAS------DHHQKLMSNFFAQTEALAFGKTKETVEAEFLAAGKTAEEVAELVPFKVFEGNRPTNSILVKQINPRSLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPEL 525          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_MYCUA (Glucose-6-phosphate isomerase OS=Mycobacterium ulcerans (strain Agy99) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 89/194 (45.88%), Postives = 113/194 (58.25%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK    DG  +  + GEI +GE GTNGQH+FYQL+HQG R++P DFIG  +    +       S HD LMSNFFAQ   LA GKT E++  E     ++PHK   GNR         L    +GQL+A+YEH++  EG +WGI+SFDQWGVELGK   TQ +  L        P    + ST  L+ RY
Sbjct:  356 TMESNGKSTRADGTAVTTDTGEIYWGERGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTVEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPAAVVPHKVMPGNRPSTSILAKRLTPSVLGQLIAVYEHQVFTEGVVWGIDSFDQWGVELGK---TQAKALLPVITSDGSPQRQSDSSTDALVRRY 546          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_EDWI9 (Glucose-6-phosphate isomerase OS=Edwardsiella ictaluri (strain 93-146) GN=pgi PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 88/202 (43.56%), Postives = 123/202 (60.89%), Query Frame = -3
Query:  244 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENV--------APHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRY 822
            +MESNGK V  DG  + ++ G I +GEPGTNGQH+FYQLIHQG ++IPCDFI    S  P+        +H +L+SNFFAQ +ALA GK+ E +++E            H++P K F GNR         +  Y++G L+A+YEH+I  +G I  I SFDQWGVELGK LA ++  +L  +    +P+   + ST  L+ R+
Sbjct:  353 NMESNGKYVDRDGQVVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAISHNPLG------DHHGKLLSNFFAQTEALAFGKSREAVEEEFAKAGKSAAEVQHIVPFKVFEGNRPTNSILLREITPYSLGMLIALYEHKIFTQGVILNIFSFDQWGVELGKQLANRILPELEDA----QPVRSHDSSTNALINRF 544          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_COREF (Glucose-6-phosphate isomerase OS=Corynebacterium efficiens GN=pgi PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.712e-40
Identity = 89/166 (53.61%), Postives = 107/166 (64.46%), Query Frame = -3
Query:  328 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQV 822
            +MESNGK V  DG P+    GEI +GEPGTNGQH+F+QLIHQG R+IP DFIG  + +Q   L     S HD LMSNFFAQ   LA GKT E++  E V  +LI HK   GNR         L    +G L+A+YEH + V+G IW INSFDQWGVELGK  A+ +
Sbjct:  351 TMESNGKSVRRDGSPVTTGTGEIYWGEPGTNGQHAFFQLIHQGTRLIPADFIGFARPKQD--LPAGEKSMHDLLMSNFFAQTKVLAFGKTAEEIAAEGVDDNLINHKVMPGNRPTTTILAEELTPAVLGALIALYEHIVFVQGVIWDINSFDQWGVELGKQQASDL 514          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_ASPOR (Glucose-6-phosphate isomerase OS=Aspergillus oryzae GN=pgiA PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.138e-39
Identity = 90/199 (45.23%), Postives = 120/199 (60.30%), Query Frame = -3
Query:  229 SMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAPHLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHASRMKREPIEGFNFSTTTLLTRYLEASS 822
            SMESNGK ++  G  + +  G I FGEP TN QHSF+QL+HQG ++IP DFI   +S  PV    E   +   L SNF AQ +AL VGKTPEQ++ E    +L+PHKTF GNR         +    +G L+A YEH    EG +W INSFDQWGVELGK LA +++++L  S        G + ST+ LL  + + ++
Sbjct:  361 SMESNGKAITRSGEYVKYTTGPILFGEPATNAQHSFFQLLHQGTKLIPSDFIMAAESHNPV----EGGKHQRMLASNFLAQSEALMVGKTPEQVKTEGAPDNLVPHKTFLGNRPTTSILAQKITPSTLGALIAYYEHLTFTEGAVWNINSFDQWGVELGKVLAKKIQQELETSGAG----AGHDASTSGLLAAFKQKAN 551          
BLAST of CX069997 vs. ExPASy Swiss-Prot
Match: G6PI_RAT (Glucose-6-phosphate isomerase OS=Rattus norvegicus GN=Gpi PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.486e-39
Identity = 86/180 (47.78%), Postives = 116/180 (64.44%), Query Frame = -3
Query:  307 MESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQG-RVIPCDFIGVVKSQQPVYLKGEVVSNHDELMSNFFAQPDALAVGKTPEQLQKENVAP--------HLIPHKTFSGNRXXXXXXXXXLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLHAS 819
            MESNGK ++  G  + ++ G I +GEPGTNGQH+FYQLIHQG ++IPCDF+  V++Q P+        +H  L++NF AQ +AL  GK+PE+ +KE  A          L+PHK F GNR         L  + +G L+A+YEH+I V+G IW INSFDQWGVELGK LA ++  +L  S
Sbjct:  357 MESNGKYITKSGARVDYQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPI----RNGLHHKILLANFLAQTEALMKGKSPEEARKELQAAGKSPEELEKLLPHKVFEGNRPTNSIVFTKLTPFILGALIAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPELDGS 532          
The following BLAST results are available for this feature:
BLAST of CX069997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
G6PI_CHLCH5.108e-4047.22Glucose-6-phosphate isomerase OS=Chlorobium chloro... [more]
G6PI_ANASK5.108e-4046.15Glucose-6-phosphate isomerase OS=Anaeromyxobacter ... [more]
G6PI_PROMH6.671e-4044.55Glucose-6-phosphate isomerase OS=Proteus mirabilis... [more]
G6PI_BIFLO6.671e-4049.40Glucose-6-phosphate isomerase OS=Bifidobacterium l... [more]
G6PI_VIBSL8.712e-4049.44Glucose-6-phosphate isomerase OS=Vibrio splendidus... [more]
G6PI_MYCUA8.712e-4045.88Glucose-6-phosphate isomerase OS=Mycobacterium ulc... [more]
G6PI_EDWI98.712e-4043.56Glucose-6-phosphate isomerase OS=Edwardsiella icta... [more]
G6PI_COREF8.712e-4053.61Glucose-6-phosphate isomerase OS=Corynebacterium e... [more]
G6PI_ASPOR1.138e-3945.23Glucose-6-phosphate isomerase OS=Aspergillus oryza... [more]
G6PI_RAT1.486e-3947.78Glucose-6-phosphate isomerase OS=Rattus norvegicus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B08-C16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069997 ID=CX069997; Name=CX069997; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTTTTATTAAAGTTTAATGCATTATTAAAGTTTGATTA
CTTTACATACTATAATTCACCGGCATAACCAGTCTTCAGTAAAATTTTAT
GCAGTCTCCGCGATAATTTCAGTTAAGTTGATACATGAAGCCAGAAACAA
GAGCCAAATTGCCAGACAATTTTTAGCAGAAACCATTTATATCCGTGGAA
GAAGCGTTGAAGGATCAGATGGGATATCAGAACTTGCCTCTAGGTATCTT
GTCAGCAGTGTTGTAGTACTGAAATTAAAGCCCTCGATCGGTTCTCTTTT
CATACGAGAAGCATGAAGTTGCTTTCTAACCTGAGTAGCCAGAGACTTCC
CCAACTCAACTCCCCACTGATCGAAAGAATTGATTCCCCATATGAAACCT
TCCACAGCTATTCTGTGTTCGTAGATTGCCAACAACTGTCCAATATTGTA
AGCATTCAGTGATGGAAGCAGAAGACTGAGAGAAGGCCGATTGCCAGAGA
AAGTCTTATGAGGAATTAGATGTGGTGCAACATTCTCTTTTTGTAGCTGC
TCGGGTGTCTTCCCCACTGCAAGGGCATCTGGCTGTGCAAAAAAGTTGGA
CATGAGTTCATCATGGTTACTCACCACTTCACCTTTCAGGTAAACTGGTT
GCTGGCTCTTCACAACACCAATAAAATCACAAGGAATTACACGTCCCTGG
TGAATTAGTTGATAAAAGCTGTGCTGACCATTAGTTCCAGGTTCACCAAA
ATCAATTTCACCGGCCTCAAAGGGAAGGGGCACGCCATCAATTGACACTC
CCTTGCCATTACTCTCCATGCTAA
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