CX069988

Overview
NameCX069988
Unique NameCX069988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069988_ssr670 microsatellite CX069988_ssr670:670..681. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:377..1175. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50
Identity = 110/216 (50.93%), Postives = 136/216 (62.96%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+ FD+ Y++NL   KGLL SDQ LF+  G  T   V +F  N  AF   F  +M++MGN+ PLTG QG+IRLNC +VN
Sbjct:  109 CSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFN--GGSTDNTVRNFSSNTAAFNSAFTAAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.035e-50
Identity = 110/216 (50.93%), Postives = 136/216 (62.96%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            C + VSCADIL +AA  SV   GGPSW V LGRRDS TAN + AN +LP P  +L EL  +F   GL D  D+VALSGAHT G+AQCQ FR RLY+  N       +D++F   L+  CP+  G     LA  D TTP+ FD+ Y++NL   KGLL SDQ LF+  G  T   V +F  N  AF   F  +M++MGN+ PLTG QG+IRLNC +VN
Sbjct:  109 CSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGL-DVTDMVALSGAHTIGQAQCQNFRDRLYNETN-------IDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFN--GGSTDNTVRNFSSNTAAFNSAFTVAMVKMGNISPLTGTQGQIRLNCSKVN 314          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.352e-50
Identity = 109/214 (50.93%), Postives = 136/214 (63.55%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +AA  SV   GG SW V LGRRDS TA+ + AN +LP PF  L  L S+F N G   K +LV LSGAHT G+AQC  FR R+Y+ +N       +D T+ + L+  CP  G    L+ FDVTTP+ FDN Y+ NLR +KGLL SDQ+LF+  G  T + V  +  N   F  +F  +MI+MGNL PLTG  G+IR NCR+ N
Sbjct:  113 CPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCTAFRTRIYNESN-------IDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50
Identity = 107/215 (49.77%), Postives = 140/215 (65.12%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ-NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSCADI+ +AA  +    GGP WAV +GRRDS  A +ALAN   LPG  DTLD+L   F   GLN + DLVALSGAHT G++QC  FR RLY+ ++       +DA F    ++ CP  G  G LA  D+ TP+ FDN Y+ NL  +KGLL +DQ LF + GA T  IV ++ +N++ F  +F T+MI+MGN++PLTG+ GEIR  C  VN
Sbjct:  115 CPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTR-DLVALSGAHTIGQSQCFLFRDRLYENSS------DIDAGFASTRKRRCPTVGGDGNLAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGS-GASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.761e-50
Identity = 107/217 (49.31%), Postives = 141/217 (64.98%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSCADIL IAA  SV   GGP+W V +GRRD+RTA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+  G   G LA  DVTT   FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  N ++F  +F  +MI+MG++ PLTG+ GEIR  C R N
Sbjct:  118 ACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCTNFRARIYNETN-------INAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFN--GGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.265e-48
Identity = 100/214 (46.73%), Postives = 131/214 (61.21%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP  VSCAD+L + A  S+ + GGPSW V LGRRD+R A+   + +N+P P  TL  + + F   GL D  DLVAL G+HT G ++C  FR RLY+      PD TL+  +   L++ CP  GN   L N D  TP  FDN Y+ NL   +GLL SD+ LF T   +T  +V+ +  N+ AFF+ F  SM++MGN+ PLTG  GEIR  CRRVN
Sbjct:  130 CPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILF-TQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN 341          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.807e-48
Identity = 105/217 (48.39%), Postives = 136/217 (62.67%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSCADIL I A  SV L GGP W+V LGRRDS TAN A AN   +P P  TL  L + F+  GL+ + D+VALSGAHT GRAQC  FR R+Y+ +N       +D +F    R+ CP   G      AN DV +PD FD+ ++  L  +KGLL SDQ LF+    D+  I   +  N NAF+++F  +MI+MG++ PLTG+ G+IR NCRR N
Sbjct:  110 CPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTR-DMVALSGAHTIGRAQCVTFRNRIYNASN-------IDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIA--YSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.386e-47
Identity = 108/216 (50.00%), Postives = 133/216 (61.57%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNG-GVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +AA  SV   GGPSW V LGRRDS TA+ ALAN +LP P   L  L ++F    L+ + DLVALSGAHT G AQC+ FR  +Y+       D  ++A F    R  CP   GNG G LA  D  TP  FDN Y++NL  ++GLL SDQ+LF+  G  T  +V  +      F ++F  +MIRMGN+ PLTG QG+IR  C RVN
Sbjct:  116 CPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSDLPAPSLDLANLTAAFAKKRLS-RTDLVALSGAHTIGLAQCKNFRAHIYN-------DTNVNAAFATLRRANCPAAAGNGDGNLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFN--GGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.942e-47
Identity = 101/216 (46.76%), Postives = 137/216 (63.43%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADI+ IAA  SV + GGP W V LGRRDS+TA+ + AN N+P P  +L  L S F+  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D++F +  +  CP     G   LA  D+ TP  FDN Y+ NL  +KGLL SDQ L++  G  T + V+ +  N   F  +FV  MI+MG++ PLTG++GEIR +C +VN
Sbjct:  116 CPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTR-DMVALSGAHTIGQARCTSFRARIYNETN-------IDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYN--GGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 185.267 bits (469), Expect = 3.445e-46
Identity = 100/217 (46.08%), Postives = 139/217 (64.06%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSCADIL IAA  SV   GGP+W V +GRRD++TA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+    G   LA  D+ +   FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  + ++F  +F  +MI+MG++ PLTG+ GEIR  C + N
Sbjct:   90 ACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCVNFRARVYNETN-------INAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFN--GGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
The following BLAST results are available for this feature:
BLAST of CX069988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER2_ORYSJ1.035e-5050.93Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.035e-5050.93Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER1_ARAHY1.352e-5050.93Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER5_ARATH5.136e-5049.77Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER52_ARATH8.761e-5049.31Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER36_ARATH1.265e-4846.73Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PER67_ARATH4.807e-4848.39Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER70_MAIZE2.386e-4750.00Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER4_VITVI6.942e-4746.76Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PERP7_BRARA3.445e-4646.08Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069988 ID=CX069988; Name=CX069988; organism=Citrus sinensis; type=EST; length=798bp
GGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTG
AACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGA
AGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCC
AGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTG
GCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTC
GGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAA
CACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGA
GGAAACTATGCCCACAAGGTGGAAACGGCGGCGTTCTTGCTAATTTTGAT
GTCACGACACCTGATGTTTTCGACAACAAATACTTCTCCAATCTTAGAGG
CCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTG
CCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTC
TTTAAAAACTTTGTGACCTCAATGATAAGAATGGGAAATTTGAAACCACT
GACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAA
ACAGTAATATTGCAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGC
TCTTTCTAAATAAGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTT
ACAAACTCAAATTTAATCTGATCGTTTTGCCTGAAACATGTTATGTAC
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