CX069988

Overview
NameCX069988
Unique NameCX069988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069988_ssr670 microsatellite CX069988_ssr670:670..681. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:377..1175. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.876e-46
Identity = 101/214 (47.20%), Postives = 137/214 (64.02%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+ FDN Y+ NL  +KGLL+SDQ LF T GA T +IV ++ RN + F  +F  +MI+MG+++ LTG+ G+IR  C  VN
Sbjct:  110 CPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSS------DIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGT-GASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.002e-45
Identity = 104/218 (47.71%), Postives = 134/218 (61.47%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF----GRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP  FD++D  K  F   GLN + DLVAL+GAHT G A C   R RL++FN+TG PDP++DATFL QLR LCPQ G+       D  + + FD  YFSNLR  +G+L+SDQ+L++   A T   V+ F    G     F   F  SM++M N++  TG  GEIR  C  +N
Sbjct:  117 CPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVDIQKRKFLTKGLNTQ-DLVALTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCPQNGDASRRVGLDTGSVNNFDTSYFSNLRNGRGVLESDQKLWT--DASTQVFVQRFLGIRGLLGLTFGVEFGRSMVKMSNIEVKTGTNGEIRKVCSAIN 330          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 101/214 (47.20%), Postives = 133/214 (62.15%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSCADIL +AA   V   GGPSW V LGRRDS TA+ A    +LP P  +L +L S++    LN   D+VALSGAHT G+AQC  F   +Y+       D  +++ F   LR  CP+ G+   LA  D TTP+ FDN Y++NL  +KGLL SDQELF++   D+   V  F  + +AF   F T+M++MGNL P TG QG+IR +C +VN
Sbjct:  118 CPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLN-PTDMVALSGAHTIGQAQCSSFNDHIYN-------DTNINSAFAASLRANCPRAGS-TALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDST--VRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSCWKVN 319          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.309e-45
Identity = 98/214 (45.79%), Postives = 132/214 (61.68%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDAT--FLQQLRKLCPQ-GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 634
            +CP  VSCADI+ +AA  +V L+GGP W VPLGRRDS TA+   AN NLP PF+ L+ + + F  +GL D  D+V LSGAHT G AQC   + RL++F  +G+PDP L A+   L +L+  CP    +   LA  D  +   FDN Y+ NL    GLL SDQ L + P A  AA+V+ +  N   F ++F  SM++MGN+  +TG+ G IR  C
Sbjct:  136 SCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGL-DLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTA--AALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.916e-45
Identity = 104/217 (47.93%), Postives = 135/217 (62.21%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D +F    R+ CP   G      A  D+ TP+ FD  YF  L   +GLL SDQ LF+  G  T +IV  + R+  AF+++FV +MI+MG++ PLTG+ G+IR +CRR N
Sbjct:  119 CPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFN--GGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.225e-44
Identity = 104/218 (47.71%), Postives = 127/218 (58.26%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 655
            C +VVSC+DIL +AA  SV LSGGP +AVPLGRRDS   A++     NLP PF    +L + F N  LN   DLVALSG HT G A C  F  RLY        DPT++  F   L++ CP   +     N D+ +PDVFDNKY+ +L  R+GL  SDQ+LF      T  IVE F  +Q  FF  F  +MI+MG +  LTG QGEIR NC   N  S
Sbjct:  134 CGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLYP-----NQDPTMNQFFANSLKRTCPTANSSNTQVN-DIRSPDVFDNKYYVDLMNRQGLFTSDQDLF--VDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARNTQS 342          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.211e-44
Identity = 100/217 (46.08%), Postives = 127/217 (58.53%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 652
            ACP VVSCADIL +AA   V   GGPSW V LGRRDS T +      +LP P  +L  L +++    L D  D+VALSGAHT G+AQC  F G +Y+       D  ++A F   L+  CP  G G  LA  D  TP VF N Y+ NL  +KGLL SDQELF+    D+   V +F  +  AF   F  +M++MGNL PLTG  G+IRL C ++N +
Sbjct:  117 ACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCSSFNGHIYN-------DTNINAAFATSLKANCPMSG-GSSLAPLDTMTPTVFGNDYYKNLLSQKGLLHSDQELFNNGSTDST--VSNFASSSAAFTSAFTAAMVKMGNLGPLTGTSGQIRLTCWKLNSS 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.500e-44
Identity = 100/216 (46.30%), Postives = 129/216 (59.72%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFK-NFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSCADI+T+A   SVAL+GGPS+++P GRRD R +N    +  LPGP  ++    S F N G+N   D VAL GAHT G+  C  F  R+  F  TG+PDP++D   +  LR  C         A  D ++P  FDN++F  +R R+G+LQ DQ L S P   T  IV  +  N NAFFK  FV +M++MG +  LTG  GEIR NCRR N
Sbjct:  108 ACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTC----RNSATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDP--QTRGIVARYA-NNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.225e-43
Identity = 101/219 (46.12%), Postives = 126/219 (57.53%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF----GRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSCADIL +AA  SV LSGG SW VP GRRD R + +A    NLP P D++D  K  F   GLN + DLV L G HT G ++CQFF  RL++FN T   DP +D +F+  L+ LCPQ          D  +   FD  YFSNLR R+G+LQSDQ L++ P   T + V+ +    G     F   F  SM++M N+   TG  GEIR  C   N
Sbjct:  116 ACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVS-QASDVSNLPAPSDSVDVQKQKFAAKGLNTQ-DLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCPQNTGAANRVALDTGSQFKFDTSYFSNLRNRRGVLQSDQALWNDP--STKSFVQRYLGLRGFLGLTFNVEFGKSMVKMSNIGVKTGTDGEIRKICSAFN 330          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 2.090e-43
Identity = 99/216 (45.83%), Postives = 134/216 (62.04%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLD-ATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL-FSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP  VSCADIL +AA  SV +SGGP W V +GR+DSRTA++  A   LP P  T+  L S+F+N+GL+ + D+VALSG HT G+A+C  F  RL     TG+P    D   FL+ L++LC   G    +   D+ TP  FDN+Y+ NL   +GLL SDQ L    PG  T AIVE +  +Q+ FF++F  +M++MG +    G+  EIR NCR +N
Sbjct:  139 CPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPL-QTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPG--TRAIVETYATDQSVFFEDFKNAMVKMGGIP--GGSNSEIRKNCRMIN 348          
The following BLAST results are available for this feature:
BLAST of CX069988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER4_ARATH5.876e-4647.20Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERN1_TOBAC1.002e-4547.71Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER66_MAIZE1.309e-4547.20Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER10_ARATH1.309e-4545.79Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER68_ARATH2.916e-4547.93Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER12_ARATH3.225e-4447.71Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER42_MAIZE4.211e-4446.08Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER57_ARATH5.500e-4446.30Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER2_ARAHY1.225e-4346.12Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER40_ARATH2.090e-4345.83Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069988 ID=CX069988; Name=CX069988; organism=Citrus sinensis; type=EST; length=798bp
GGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTG
AACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGA
AGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCC
AGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTG
GCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTC
GGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAA
CACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGA
GGAAACTATGCCCACAAGGTGGAAACGGCGGCGTTCTTGCTAATTTTGAT
GTCACGACACCTGATGTTTTCGACAACAAATACTTCTCCAATCTTAGAGG
CCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTG
CCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTC
TTTAAAAACTTTGTGACCTCAATGATAAGAATGGGAAATTTGAAACCACT
GACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAA
ACAGTAATATTGCAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGC
TCTTTCTAAATAAGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTT
ACAAACTCAAATTTAATCTGATCGTTTTGCCTGAAACATGTTATGTAC
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