CX069988

Overview
NameCX069988
Unique NameCX069988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069988_ssr670 microsatellite CX069988_ssr670:670..681. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:377..1175. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.730e-43
Identity = 101/216 (46.76%), Postives = 130/216 (60.19%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKP-DPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSCADIL +AA  +V L+ G  W VP GRRD R +  + AN NLPGP D++   +  F  +GLN + DLV L G HT G A C  FR RL  FN TG+  DPT+D TFL QL+  CPQ G+G V  + D  +   +D  Y++NL   +G+LQSDQ L++ P   T  IV+     ++ F   F  SM+RM N+  +TG  GEIR  C  VN
Sbjct:  119 ACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLNTR-DLVVLVGGHTIGTAGCGVFRNRL--FNTTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPA--TRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.081e-43
Identity = 98/219 (44.75%), Postives = 128/219 (58.45%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNA-----FFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +AA  SV LS GPSW VP GR+D R +    A+ NLP P D++   K  F++ GL D  DLV L GAHT G+  C FFR RLY+F  TG  DPT+  +FL QL+ LCP  G+G      D+ +P  FD  +F NLR    +L+SDQ L+S   A+T A+V+ +           F   F  +MI+M ++   T   GE+R  C +VN
Sbjct:  114 CPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGRISLATEAS-NLPSPLDSVAVQKQKFQDKGL-DTHDLVTLLGAHTIGQTDCLFFRYRLYNFTVTGNSDPTISPSFLTQLKTLCPPNGDGSKRVALDIGSPSKFDESFFKNLRDGNAILESDQRLWS--DAETNAVVKKYASRLRGLLGFRFDYEFGKAMIKMSSIDVKTDVDGEVRKVCSKVN 328          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 94/215 (43.72%), Postives = 135/215 (62.79%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSCADI+ +AA  +VAL+GGP W V LGR+DS TA++  ++  +P P      L   F    L+ K D+VALSG+H+ G+ +C     RLY+ + +GKPDP L+ ++ ++L KLCP GG+  V  + D  TP VFDN+YF +L   +G L SDQ L++     T   V+ F  +Q+ FF+ F   M+++G+L+  +G  GEIR NCR VN
Sbjct:  111 ACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLD-ATPQVFDNQYFKDLVSGRGFLNSDQTLYT--NLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVN 319          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.311e-42
Identity = 91/214 (42.52%), Postives = 131/214 (61.21%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            C   VSCADIL +A    V L+GGPS+ V LGRRD R + +A     LP P   L++L   F   GL+ + D++ALSGAHT G A C     R+Y+F+ T + DP+++  ++ QL+++CP G +  +  N D T+P  FDN YF NL+  KGL  SDQ LF+     + + V  F  ++ AF + F+T++ ++G +  LTGN GEIR +C RVN
Sbjct:  115 CRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFT--DQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 98/217 (45.16%), Postives = 129/217 (59.45%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVAL-SGAHTFGRAQCQFFRGRLYDFNNTGKP-DPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSCADIL +AA  SV+L+ G SW VP GRRD R +  +  N NLP P D+L   +  F    LN + DLV L  G HT G A C F   R+  FN++G   DPT+D TF+ QL++LCPQ G+G    + D  + + FD  YF NL   +G+LQSD  L+++P   T +IV++F   +  F   F  SM++M N+   TG  GEIR  C  VN
Sbjct:  109 ACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTR-DLVTLVGGGHTIGTAACGFITNRI--FNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDLDTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPA--TRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.555e-41
Identity = 93/214 (43.46%), Postives = 123/214 (57.48%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP  VSC+DI+T+A   +V L GGPS+ VP GRRD   +N   AN+ LP PF +++ + S F N G+N   D VAL GAHT G A C  F  R+ +F  TG PDP++D T   +LR  C   G    L      TP  FDN +F  +R RKG+L  DQ + S P   T+ +V  +  N   F + F  +M++MG +  LTG+ GEIR NCR  N
Sbjct:  111 CPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPA--TSGVVLQYASNNELFKRQFAIAMVKMGAVDVLTGSAGEIRTNCRAFN 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.358e-41
Identity = 101/220 (45.91%), Postives = 136/220 (61.82%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY-DFNNTGKPDPTLDATFLQQLRKLCPQG---GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELF-STPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGN-LKPLTGNQGEIRLNCRRVN 646
            CP VVSCAD+LTI A  +  L GGP W VP+GR+DS+TA+  LA  NLP P + L  + + F + GL+ + D+VAL GAHT G+AQC+ FR R+Y DF  T   +P +  T+L  LR++CP     G+  V A  D  TP++FDN  +  L   +GLL SDQE++ S  G  T  IV  +  +  AFF+ F  SM++MGN L   +   GE+R NCR VN
Sbjct:  119 CPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNP-VSETYLASLREICPASSGEGDSNVTA-IDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.293e-40
Identity = 102/219 (46.58%), Postives = 129/219 (58.90%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN--NTGKPDP-TLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP-GADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P  +LD L  +F+  GLN + DL+ALSGAHT G+A+C  F+ R+   N   T   D     +TF + L   C        L+  D+ TP  FDN YF NL   +GLL SD  L S     +    V ++  NQ+ FF +FV SM++MGN+  LTG +GEIR NCR VN
Sbjct:  118 ACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMGNINVLTGIEGEIRENCRFVN 335          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.219e-40
Identity = 93/210 (44.29%), Postives = 126/210 (60.00%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 634
            CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P     F + L + CP  GN   L   D+ TP+ FDN Y+ NL   +GLL SDQ LF+    D  +IV ++  N   F  +F  +M++M  +  +TG  G +R  C
Sbjct:  117 CPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEP----NFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTD--SIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.219e-40
Identity = 93/210 (44.29%), Postives = 126/210 (60.00%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 634
            CP VVSCADIL +AA  +    GGPSW V LGRRDS T+N A A  +LP     L +L S+F N GLN + ++VALSG+HT G+A+C  FRGR+Y  N+T + +P     F + L + CP  GN   L   D+ TP+ FDN Y+ NL   +GLL SDQ LF+    D  +IV ++  N   F  +F  +M++M  +  +TG  G +R  C
Sbjct:  117 CPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTR-EMVALSGSHTLGQARCIRFRGRIY--NSTLRIEP----NFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTD--SIVTEYVNNPATFAADFAAAMVKMSEIGVVTGTSGIVRTLC 317          
The following BLAST results are available for this feature:
BLAST of CX069988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER71_ARATH2.730e-4346.76Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER25_ARATH6.081e-4344.75Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PER17_ARATH1.355e-4243.72Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER45_ARATH2.311e-4242.52Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER62_ARATH1.956e-4145.16Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER28_ARATH2.555e-4143.46Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER11_ARATH4.358e-4145.91Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER20_ARATH6.293e-4046.58Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER2_ZINEL8.219e-4044.29Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL8.219e-4044.29Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069988 ID=CX069988; Name=CX069988; organism=Citrus sinensis; type=EST; length=798bp
GGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTG
AACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGA
AGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCC
AGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTG
GCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTC
GGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAA
CACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGA
GGAAACTATGCCCACAAGGTGGAAACGGCGGCGTTCTTGCTAATTTTGAT
GTCACGACACCTGATGTTTTCGACAACAAATACTTCTCCAATCTTAGAGG
CCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTG
CCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTC
TTTAAAAACTTTGTGACCTCAATGATAAGAATGGGAAATTTGAAACCACT
GACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAA
ACAGTAATATTGCAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGC
TCTTTCTAAATAAGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTT
ACAAACTCAAATTTAATCTGATCGTTTTGCCTGAAACATGTTATGTAC
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