CX069988

Overview
NameCX069988
Unique NameCX069988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069988_ssr670 microsatellite CX069988_ssr670:670..681. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:377..1175. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.986e-37
Identity = 88/220 (40.00%), Postives = 129/220 (58.64%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFF-----KNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP VVSC+DI+ +AA  +++L+ GP++ VP GRRD R +N +LA +++P   D+++ LK+ F   GLN K DLV LS AHT G   C F   RLYDF   G+PDPT++ TFL +L   CPQ G+  V    D  +  +FD +   N++    +LQ+D  L+      T  +V+ +    N FF      +FV ++++MG +   TG +GEIR  C   N
Sbjct:  111 ACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYE--DVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.512e-37
Identity = 87/215 (40.47%), Postives = 117/215 (54.42%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSCADI+T+A   S+   GGP+W VP GRRD R +N A A  N+P PF     L + F N GL+ K DLV LSGAHT G + C  F  RL++F   G  DP+LD+ +   L+ + C    +       D  + + FD  Y+  +  R+GL +SD  L   P A  A +    G ++  FF  F  SM +MG +   TG+ GEIR  C  VN
Sbjct:  114 CPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVK-DLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAA-LAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.505e-37
Identity = 89/215 (41.40%), Postives = 119/215 (55.35%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            +C   VSCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP + + EL   F    L  + D++ALS AHT G A C     R+Y+FN T   DPTL+  + ++L+  CP+  +  +  N D TTP  FDN YF NL+  KGL  SDQ LF+     +   V D+ +N  AF K FVT+M ++G +   T   G IR +C   N
Sbjct:  118 SCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFT--DGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.111e-36
Identity = 91/218 (41.74%), Postives = 121/218 (55.50%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFF---KNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACPR VSCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP D++   K  F    LN + DLV L+  HT G A C  FR R ++++NTG PDPT+  +F+  ++  CP  G+       D  + D FD  Y +NL+  +GLL+SDQ L++    +T  IVE     +  F      F  SM +M  ++  TG  GEIR  C  VN
Sbjct:  118 ACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWT--NLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVCSAVN 330          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.111e-36
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            C   VSCADILT+A    V L+GGP + V LGR D  ++  A     LP P D +++L S F   GL+   D++ALSGAHT G A C     R+Y FN T K DPT++  ++ +L+  CP+  +  V  N D TTP  FDN Y+ NL+  KGL  SDQ LF+     +   V+ +  N   F + F+ SMI++G +   TG+ G IR +C   N
Sbjct:  119 CRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFT--DRRSKPTVDLWANNGQLFNQAFINSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.232e-36
Identity = 88/214 (41.12%), Postives = 117/214 (54.67%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +AA   V L GGP + V LGRRD   +  +     LP P   +  L   F + GL+   D++ALSGAHT G + C  F  RL++F+     DPT+D  + QQL + C    N   + + D+T+ D FDN Y+ NL  RKGL  SDQ LF+     + A V  F  N   F+  F ++M  +G +    GNQGEIR +C   N
Sbjct:  121 CPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFN--DLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDCSAFN 330          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.232e-36
Identity = 83/215 (38.60%), Postives = 116/215 (53.95%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR-KLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSCADI+ +A+  +V  +GGP+W+VP GRRD R +N A A  N+P P   +  L++ F N GL D  DLV LSGAHT G + C  F  RLY+F   G  DP LD+ +   L+ + CP   +   +   D  +   FD  Y+  +  R+GL QSD  L + P    + I      +  +FF  F  SM +MG +   TG+ G +R  C   N
Sbjct:  113 CPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGL-DLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNP-TTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36
Identity = 83/214 (38.79%), Postives = 111/214 (51.87%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP PF+ +  L + F++ GL DK DLV LSG HT G   C     RLY+F   G  DP LD  +  +LR  C        L   D  +   FD  YF  +  R+GL QSD  L        + +++    + + FFK+F  SM++MG +  LTG  GE+R  CR VN
Sbjct:  119 CPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPTDTTTAL-EMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQ-ETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.604e-35
Identity = 92/214 (42.99%), Postives = 123/214 (57.48%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP PF    +L  +F   G   + D+VALSGAHT G A+C  F+ RL        PD +LD+TF   L K C  G N      FD T  D FDN YF+ L+ + G+L SDQ LF+TP   T  +V  +  NQ  FF +F  +M +M NL    G+QGE+R NCR +N
Sbjct:  114 CPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLSKTCSAGDNAE--QPFDATRND-FDNAYFNALQMKSGVLFSDQTLFNTP--RTRNLVNGYALNQAKFFFDFQQAMRKMSNLDVKLGSQGEVRQNCRSIN 314          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35
Identity = 85/219 (38.81%), Postives = 123/219 (56.16%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-----VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADIL +A   +V L+G PS+ V  GRRD  T+++   +  LP P  + D+  S F++ GLN  LD+  L G+H+ GR  C +   RLY++N TGKP PT++  FL ++ K CP     G     V  N D  +   F + ++S +   K +L+ DQ+L      DT  I ++F      F K+F  SM +MG +  LT  +GEIR +CR +N
Sbjct:  122 CPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYND--DTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
The following BLAST results are available for this feature:
BLAST of CX069988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER43_ARATH4.986e-3740.00Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER39_ARATH6.512e-3740.47Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER73_ARATH8.505e-3741.40Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER70_ARATH1.111e-3641.74Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER50_ARATH1.111e-3641.12Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER55_ARATH3.232e-3641.12Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER3_ARATH3.232e-3638.60Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER56_ARATH7.200e-3638.79Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER47_ARATH1.604e-3542.99Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER26_ARATH2.095e-3538.81Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069988 ID=CX069988; Name=CX069988; organism=Citrus sinensis; type=EST; length=798bp
GGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTG
AACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGA
AGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCC
AGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTG
GCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTC
GGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAA
CACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGA
GGAAACTATGCCCACAAGGTGGAAACGGCGGCGTTCTTGCTAATTTTGAT
GTCACGACACCTGATGTTTTCGACAACAAATACTTCTCCAATCTTAGAGG
CCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTG
CCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTC
TTTAAAAACTTTGTGACCTCAATGATAAGAATGGGAAATTTGAAACCACT
GACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAA
ACAGTAATATTGCAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGC
TCTTTCTAAATAAGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTT
ACAAACTCAAATTTAATCTGATCGTTTTGCCTGAAACATGTTATGTAC
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