CX069988

Overview
NameCX069988
Unique NameCX069988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.095e-35
Identity = 86/214 (40.19%), Postives = 120/214 (56.07%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELF----STPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 634
            CP ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP PF  +  LK +F N GLN K DLV LSG HT G + C     RLY+F   G  DP+++ +++++L++ CP       L N D  +   FD  YF  +  +KGL  SD  L     +     T AI+       ++F K+F  SM+++G ++ LTG  GEIR  C
Sbjct:  113 CPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSL-NMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPV---FSSFNKDFSDSMVKLGFVQILTGKNGEIRKRC 321          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.573e-35
Identity = 83/215 (38.60%), Postives = 115/215 (53.49%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            +C   VSCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGP D +D+L + F    L  + D++ALS AHT G A C     R++ FN     DPTL+  +  +L+K CP+  +  +  N D  TP  FDN YF NL+  KGL  SDQ LF+     +   V  +  N  AF + FV +M ++G +     + G IR +C   N
Sbjct:  118 SCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFT--DGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.040e-34
Identity = 93/221 (42.08%), Postives = 119/221 (53.85%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDF---NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRN-QNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSCAD+L + A  +V LS GP WAVPLGRRD R    ++AN+   LP P     EL   F    L D  DLV LS  HT G + C  F  RLY+F   +N    DPTL+  ++ +LR  C    +   L   D  +   FD  YF N+  R+GL  SD EL  T G   A +    G   ++ FF +F  SM++MG ++ LTG+QGEIR  C  VN
Sbjct:  111 ACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRV---SIANETDQLPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELL-TNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.501e-33
Identity = 85/216 (39.35%), Postives = 121/216 (56.02%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP P   + +L   F + G + + ++VALSGAHT G + C+ F  R+   N+TG      +  F   L+K C    N   ++ F DV TP+ FDN YF N+    GLL+SD  LFS P   T   VE + R+Q+ FF +F  +M ++     LTG +GEIR  C  +N
Sbjct:  121 ACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG-----YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDP--RTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.451e-33
Identity = 93/239 (38.91%), Postives = 128/239 (53.56%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN---TGKPDPTLDATFLQQLRKLCPQG--GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNIATRSSSSEGDLVSS 703
            +CPR VSCADI+  AA  S++L+G  S+ VP GRRD R +N A    +LP P  T   L   F+   L+ + D+V LSGAHT GR+ C  F  R+++ +    T   D  L  ++ Q LR LCP        +    D  TP+V DN Y+  L    GL  SD +L   P    AA+V  F  N+  + + F  +M++MG ++  TG  GE+RLNC    G  N +  SSSS  +L SS
Sbjct:  124 SCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNC----GVVNPSLYSSSSAVELGSS 354          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.831e-32
Identity = 86/221 (38.91%), Postives = 120/221 (54.30%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFK-NFVTSMIRMGNLKPLTGNQ--GEIRLNCRRVNGNS 655
            +CP  VSCADILT A+  +    GGP W    GRRDS+ +  A   + +P     +  L  +F++ GLN  LDLV LSGAHT G+A C   + RLY++N T   DP++DA +   L++ C          + D  TP VFDN+Y+ NL+   G+L +DQEL   P   TA +V+ F       F+  F  SM ++ N+  LTG    GEIR  C + N  +
Sbjct:  135 SCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSY-ARDVEKVPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCRWASE---TVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDP--RTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSNSRA 348          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.397e-31
Identity = 82/216 (37.96%), Postives = 121/216 (56.02%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            ACP  VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP P   + ++   F + G   + ++VALSGAH+ G + C+ F GR+   NNTG      +  F   L+K C        ++ F D+ TP+ FDN Y+ NL+   GLL+SD  L+S P   T   V+ + +NQ+ FFK+F  +M ++      TG +GEIR  C  +N
Sbjct:  110 ACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTG-----YNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP--RTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.974e-31
Identity = 89/219 (40.64%), Postives = 123/219 (56.16%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDF-GRNQNA---FFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            CP VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+  V    D  +  VFDN+ F N++  +G++ SD  L+     +   I++ +   NQ++   F  +F  +MI+MG +    G +GEIR  C   N
Sbjct:  111 CPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLYQ--DNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.190e-30
Identity = 84/216 (38.89%), Postives = 111/216 (51.39%), Query Frame = 2
Query:    2 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 646
            +CP VVSCADIL  A    V + GGP + V LGR+D   +       NLP    ++ ++ S F+  G   K +LVALSG HT G + C+ F  R++      K DP L+A F   L+ LC        +A F D  TP  FDN YF NL+   GLL SD  LF  P   T   VE +  NQ AFF++F  +M ++G +       GE+R  C   N
Sbjct:  115 SCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLK-ELVALSGGHTIGFSHCKEFSNRIFP-----KVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDP--STRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFN 322          
BLAST of CX069988 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 3.461e-30
Identity = 82/247 (33.20%), Postives = 119/247 (48.18%), Query Frame = 2
Query:    5 CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTP----------------------------------DVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 640
            CP VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+  CP         A  D+  P                                  + F  +YF  L   KGL+ SDQ+L  +    T   V  +  +   F + F  SM+++ +   LTG  G++R +C +
Sbjct:  156 CPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGS--EVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSK 399          
The following BLAST results are available for this feature:
BLAST of CX069988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER1_ARATH2.095e-3540.19Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER35_ARATH3.573e-3538.60Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER1_ORYSJ1.040e-3442.08Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER63_ARATH1.501e-3339.35Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER1_MAIZE7.451e-3338.91Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER7_ARATH2.831e-3238.91Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER31_ARATH2.397e-3137.96Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER13_ARATH6.974e-3140.64Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER41_ARATH1.190e-3038.89Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER48_ARATH3.461e-3033.20Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069988 ID=CX069988; Name=CX069988; organism=Citrus sinensis; type=EST; length=798bp
GGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCTG
AACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGA
AGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCC
AGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTG
GCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTC
GGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAA
CACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTGA
GGAAACTATGCCCACAAGGTGGAAACGGCGGCGTTCTTGCTAATTTTGAT
GTCACGACACCTGATGTTTTCGACAACAAATACTTCTCCAATCTTAGAGG
CCGCAAAGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTG
CCGATACCGCTGCCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTC
TTTAAAAACTTTGTGACCTCAATGATAAGAATGGGAAATTTGAAACCACT
GACAGGAAATCAAGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAA
ACAGTAATATTGCAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGC
TCTTTCTAAATAAGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTT
ACAAACTCAAATTTAATCTGATCGTTTTGCCTGAAACATGTTATGTAC
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