CX069987

Overview
NameCX069987
Unique NameCX069987
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX069987_ssr209 microsatellite CX069987_ssr209:209..220. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:414..1266. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 83/207 (40.10%), Postives = 108/207 (52.17%), Query Frame = -1
Query:  236 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFD--TLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 850
            IAA  SVA  GG +++V LGR D+RTAN + A   LP PFD  T+   K S +N  L +   +VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L  T  A TA  V D+  + N F  +F  +MI+MG+L P  G Q EIR  C RVN  S
Sbjct:  173 IAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLRE---MVALAGAHTVGFARCS-------TVCTSGNVNPAA------QLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNSNQGIMFSDQVL--TGDATTAGFVTDYSNDVNVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTS 360          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 73/197 (37.06%), Postives = 99/197 (50.25%), Query Frame = -1
Query:  245 VALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 832
            V + GGP + V LGR+D   +       NLP    ++ ++ S F+  G   K +LVALSG HT G + C+ F  R++      K DP L+A F   L+ LC        +A F D  TP  FDN YF NL+   GLL SD  LF  P   T   VE +  NQ AFF++F  +M ++G +       GE+R  C   N
Sbjct:  134 VTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLK-ELVALSGGHTIGFSHCKEFSNRIFP-----KVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDP--STRPFVELYANNQTAFFEDFARAMEKLGRVGVKGEKDGEVRRRCDHFN 322          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 68/204 (33.33%), Postives = 104/204 (50.98%), Query Frame = -1
Query:  245 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY--DFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 850
            +AA  +V  +GGP   +P GRRD + +  A    N+     TLD++  +F + GL+ + DLV LSGAHT G + C  F GR       N    D +LD ++ + L   C    +  +  + D  T  VFDN+Y+ NL   KGL Q+D  L       T  +VE+   ++ +FF+ +  S +++  +    G  GEIR +C  VN
Sbjct:  126 LAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALME--DNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVGEDGEIRRSCSSVN 326          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24
Identity = 73/235 (31.06%), Postives = 109/235 (46.38%), Query Frame = -1
Query:  251 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTP----------------------------------DVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRR 850
            +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+  CP         A  D+  P                                  + F  +YF  L   KGL+ SDQ+L  +    T   V  +  +   F + F  SM+++ +   LTG  G++R +C +
Sbjct:  168 LAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGS--EVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSK 399          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.165e-24
Identity = 81/209 (38.76%), Postives = 106/209 (50.72%), Query Frame = -1
Query:  245 TIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG---NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLT-GNQ-GEIRLNCRRVN 853
            T+AA  +V+     P W V  GR D R +    A ++LP        L+  F    L D +DLVALSGAHT G A C  F  RL +F   G  DP+L+ ++   L+  C       N   +   D T P  FD+ YF +L   KGL  SD  L + P   +AA +    +N  AF   F  SMI+M ++K LT G+Q GEIR NCR VN
Sbjct:  146 TLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP---SAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.203e-23
Identity = 79/205 (38.54%), Postives = 103/205 (50.24%), Query Frame = -1
Query:  236 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 850
            IAA  SVA  GG ++ V LGR D+RTAN   A   LP PFD L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L  T  A TA  V D+  + + F  +F  +MI+MG+L P  G Q EIR  C RVN  S
Sbjct:  172 IAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARCS-------TVCTSGNVNPAA------QLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL--TGDATTAGFVTDYSNDVSVFLGDFAAAMIKMGDLPPSAGAQLEIRDVCSRVNPTS 359          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22
Identity = 77/205 (37.56%), Postives = 100/205 (48.78%), Query Frame = -1
Query:  236 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 850
            IAA  S+A  GG ++ V LGR D+ TAN + A   LP P D L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP VFD  Y+ NL   +G++ SDQ L  T    TA  V  +  N   F ++F  +MI+MGNL P  G Q EIR  C RVN  S
Sbjct:  172 IAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARCS-------TVCTSGNVNPAA------QLQCNCSATLTDSDLQQLD-TTPAVFDKVYYDNLNNNQGIMFSDQVL--TGNTTTAGFVTTYSNNVTVFLEDFAAAMIKMGNLPPSAGAQLEIRDVCSRVNPTS 359          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22
Identity = 74/204 (36.27%), Postives = 99/204 (48.53%), Query Frame = -1
Query:  245 AAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ---GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 847
            A +  V L G     +  GRRDSR +        +P   D+L  + S+F ++G+ D    VAL GAH+ GR  C     RLY        DPTLD ++   L+K CP      N  + +  D  TP V DN Y+ N+   KGLL  D EL + P   TA  V     + N F + F   +  +    PLTG+QGEIR +CR VN
Sbjct:  132 ARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHSVGRVHCVNLVHRLYP-----TIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPR--TAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 72/205 (35.12%), Postives = 100/205 (48.78%), Query Frame = -1
Query:  245 IAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGV-LANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 850
            +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L   C    +    + + D  T   FDN+Y+ NL   KGL Q+D  L       T  IVE    +Q +FF  +  S ++M  +    G +GEIR +C  VN
Sbjct:  128 LAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDR--TRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of CX069987 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 66/203 (32.51%), Postives = 101/203 (49.75%), Query Frame = -1
Query:  245 TIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 853
            TIA   S+AL+GGP + V  GRRD   +N +  +  L GP  ++     +F+++G N    +  + G HT G A C  F+ R+         DP +D+    +L+K C    +  V    D  TP   DN+ +  +  ++ +L+ D  L       T +IV DF  N   F ++F  +M +MG +  LTG+ GEIR NCR  N
Sbjct:  121 TIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKKSCRGPNDPSVF--MDQNTPFRVDNEIYRQMIQQRAILRIDDNLIRD--GSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
The following BLAST results are available for this feature:
BLAST of CX069987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_SOLLC8.329e-2540.10Suberization-associated anionic peroxidase 1 OS=So... [more]
PER41_ARATH1.088e-2437.06Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER46_ARATH1.856e-2433.33Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER48_ARATH3.165e-2431.06Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER24_ARATH3.165e-2438.76Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PERX_SOLTU1.203e-2338.54Suberization-associated anionic peroxidase OS=Sola... [more]
PER2_SOLLC1.330e-2237.56Suberization-associated anionic peroxidase 2 OS=So... [more]
PER21_ARATH1.330e-2236.27Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER18_ARATH2.962e-2235.12Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER8_ARATH3.869e-2232.51Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_14B03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-14B03-C6-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069987 ID=CX069987; Name=CX069987; organism=Citrus sinensis; type=EST; length=853bp
AAAAGTTTAATTAATCTATTTGAAAATACATAACATCTTTCAGACAAGAC
CATTAGATTAAACTCAAGTTTGATCGTTAATTTATTTGAAAGTACATAAC
ATGTTTCAGGCAAAACGATCAGATTAAATTTGAGTTTGTTAAGCACAAAA
ACTCTCGCGCATATGCTGCAAGCTAGCTTATTTAGAAAGAGCTGACCAAA
TCACCCTCTGATGATGATGATCTTGTTGCAATATTACTGTTTCCATTGAC
CCTCCTGCAGTTCAATCTAATCTCCCCTTGATTTCCTGTCAGTGGTTTCA
AATTTCCCATTCTTATCATTGAGGTCACAAAGTTTTTAAAGAAAGCATTC
TGGTTCCTCCCAAAGTCCTCGACAATGGCAGCGGTATCGGCACCAGGAGT
CGAAAACAACTCTTGATCACTCTGCAGAAGGCCTTTGCGGCCTCTAAGAT
TGGAGAAGTATTTGTTGTCGAAAACATCAGGTGTCGTGACATCAAAATTA
GCAAGAACGCCGCCGTTTCCACCTTGTGGGCATAGTTTCCTCAGTTGTTG
TAAGAAGGTTGCGTCTAGGGTTGGGTCTGGCTTGCCAGTGTTGTTAAAAT
CGTATAATCTGCCCCTGAAAAATTGGCACTGAGCCCTTCCGAACGTGTGT
GCTCCGGAGAGTGCAACAAGATCAAGCTTGTCATTGAGGCCAACATTTCT
AAAACTAGATTTGAGCTCATCAAGAGTATCAAATGGTCCTGGAAGATTCT
GATTTGCAAGAGCTCTGTTTGCCGTTCTGCTGTCTCTTCTTCCCAATGGA
ACTGCCCATGACGGACCCCCTGACAAAGCAACGGATCGTTCAGCCGCAAT
AGT
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