CX069971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069971 vs. ExPASy Swiss-Prot
Match: COPE_BOVIN (Coatomer subunit epsilon OS=Bos taurus GN=COPE PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 4.324e-39 Identity = 88/222 (39.64%), Postives = 132/222 (59.46%), Query Frame = -3 Query: 167 VKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 823 V++ A YL+S +++ ++ L +S +N T L+A I+ ++++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEG PETL NLVV S H GK T+RYL+QLK H H +K + + F+R + A Sbjct: 84 VRMFAEYLASDSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYRAKENDFDRLVLQYA 305
BLAST of CX069971 vs. ExPASy Swiss-Prot
Match: COPE_DICDI (Coatomer subunit epsilon OS=Dictyostelium discoideum GN=cope PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29 Identity = 76/217 (35.02%), Postives = 124/217 (57.14%), Query Frame = -3 Query: 188 VKLLALYLSSPD-NKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQI-DEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKST---SRYLNQLKLTHPDHMLVKRASSGDESFE 823 ++LLA YLS PD N+E T+ ++ +W+SD + N L++I I+ +E+ Y+EAL+ N +E ++ +QIFLK+ R D A++ M++I D D T L+ AW+N+ G K++ A F++ +E+Y T L+LNG+AVC + M F++AE + +TLANL+ C ++ K R++NQLK P H + + FE Sbjct: 77 LQLLASYLSKPDENREGTLITITQWISDGVVKFNYHLQVIIATIYFNEQLYDEALQILNNCDHIEGLSMLIQIFLKIDRLDLAQKAYDTMKKIIDPDATPALLSLAWINIYNGEEKLKSALSSFEEMAERYGPTPLLLNGQAVCAIGMKRFEKAESLLLESIEKNPKNSDTLANLINCYINMKKPNEIIQRFINQLKTLSPKHDWTSAVNEAEALFE 293
BLAST of CX069971 vs. ExPASy Swiss-Prot
Match: COPE_CAEEL (Coatomer subunit epsilon OS=Caenorhabditis elegans GN=F45G2.4 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 59/217 (27.19%), Postives = 106/217 (48.85%), Query Frame = -3 Query: 185 VKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNE-ALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFER 823 V+ A + ++P K+ ++ ++E ++ I S L A I+ +E D ++ A + + +E A V I +KM++ A +++ M QIDED TL+QLANA + K+++A I+ + S+KY T + +AV + ++ AE D + L N +V + K R+++QLK HP+H V + + F+R Sbjct: 71 VRRYAEFRNNPAAKKKILAEVQEEVASRNIKSEIAAVLAATIL--NEADLSQDAFRAVSRFEGLEARASKVFILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGRTTDLEMHQAVVSILTQDYAAAEELLESALERDNKDADVLINSIVSAQLNEKDDDVVERFISQLKHEHPNHPWVIDFNEKEAEFDR 285 The following BLAST results are available for this feature:
BLAST of CX069971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069971 ID=CX069971; Name=CX069971; organism=Citrus sinensis; type=EST; length=825bpback to top |