CX069957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_AETGR (30S ribosomal protein S3, chloroplastic OS=Aethionema grandiflora GN=rps3 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQVQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 159 GIQVQIAGRIDGKEIARVEWIREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_AETCO (30S ribosomal protein S3, chloroplastic OS=Aethionema cordifolium GN=rps3 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.422e-26 Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQVQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 159 GIQVQIAGRIDGKEIARVEWIREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_PIPCE (30S ribosomal protein S3, chloroplastic OS=Piper cenocladum GN=rps3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYG+LGIKIWIF+DEK Sbjct: 161 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEK 220
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_BARVE (30S ribosomal protein S3, chloroplastic OS=Barbarea verna GN=rps3 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GIQVQIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIFVDE Sbjct: 159 GIQVQIAGRIDGKEIARVEWIREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_POPTR (30S ribosomal protein S3, chloroplastic OS=Populus trichocarpa GN=rps3 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25 Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQVQIAGRLDGKEIARAEW+REGRVPLQT+ AKI+YCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 159 GIQVQIAGRLDGKEIARAEWVREGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_POPAL (30S ribosomal protein S3, chloroplastic OS=Populus alba GN=rps3 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.095e-25 Identity = 55/60 (91.67%), Postives = 59/60 (98.33%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQVQIAGRLDGKEIARAEW+REGRVPLQT+ AKI+YCSYTVRTIYGVLGIKIWIFVDE+ Sbjct: 159 GIQVQIAGRLDGKEIARAEWVREGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_TOBAC (30S ribosomal protein S3, chloroplastic OS=Nicotiana tabacum GN=rps3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+DE+ Sbjct: 159 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_NICSY (30S ribosomal protein S3, chloroplastic OS=Nicotiana sylvestris GN=rps3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25 Identity = 54/60 (90.00%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGR+DGKEIAR EWIREGRVPLQTI AKIDYCSYTVRTIYGVLGIKIWIF+DE+ Sbjct: 159 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_GOSHI (30S ribosomal protein S3, chloroplastic OS=Gossypium hirsutum GN=rps3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGR+DGKEIAR EWIREGRVPLQTIGAKI+YCSY VRTIYGVLGIKIWIF+DE+ Sbjct: 159 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_GOSBA (30S ribosomal protein S3, chloroplastic OS=Gossypium barbadense GN=rps3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.868e-25 Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGR+DGKEIAR EWIREGRVPLQTIGAKI+YCSY VRTIYGVLGIKIWIF+DE+ Sbjct: 159 GIQIQIAGRIDGKEIARVEWIREGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218 The following BLAST results are available for this feature:
BLAST of CX069957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069957 ID=CX069957; Name=CX069957; organism=Citrus sinensis; type=EST; length=770bpback to top |