CX069957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_METPP (30S ribosomal protein S3 OS=Methylibium petroleiphilum (strain PM1) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIF 169 GI++ AGRL+G EIAR EW REGRVPL T+ A IDY +T YG++G+K+W++ Sbjct: 148 GIKIMSAGRLNGIEIARTEWYREGRVPLHTLRADIDYGFSEAKTTYGIIGVKVWVY 203
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_DICT6 (30S ribosomal protein S3 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIF 169 GI+V +GRL+G EIAR+EW REGR+PLQT+ A IDY TI GV+G+K+WI+ Sbjct: 149 GIKVMCSGRLNGAEIARSEWFREGRIPLQTLTADIDYGFAEAFTISGVIGVKVWIY 204
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_CAMC5 (30S ribosomal protein S3 OS=Campylobacter curvus (strain 525.92) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GI++ +AGRL G E+AR EW EGRVPL T+ AKIDY T YG +GIK+WIF E Sbjct: 148 GIKISVAGRLGGAEMARTEWYLEGRVPLHTLRAKIDYGVAEAHTTYGNIGIKVWIFKGE 206
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_CAMC1 (30S ribosomal protein S3 OS=Campylobacter concisus (strain 13826) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GI++ +AGRL G E+AR EW EGRVPL T+ AKIDY T YG +GIK+WIF E Sbjct: 148 GIKISVAGRLGGAEMARTEWYLEGRVPLHTLRAKIDYGVAEAHTTYGNIGIKVWIFKGE 206
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_BORGA (30S ribosomal protein S3 OS=Borrelia garinii GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK*EFTGL*SPPINGNKPNKERALFIFNQNK 271 G++++IAGRL G EIAR+ ++EGRVPL T+ A IDY +T YG++G+K+W+F E T + + KP +ER + N +K Sbjct: 151 GLKIKIAGRLGGAEIARSFEVKEGRVPLHTLRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQTNSDAGQVINKKPFRERGESVKNFDK 240
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_AZOC5 (30S ribosomal protein S3 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GI++ +GRL G EIAR EW REGRVPL T+ A +DY + T T YG G+K+WIF E Sbjct: 148 GIRINCSGRLGGAEIARLEWYREGRVPLHTLRADVDYGTATAFTTYGTCGVKVWIFKGE 206
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_AKKM8 (30S ribosomal protein S3 OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWI 166 GI+++ AGRL G +IARAEW REG+VPLQT+ IDY RT+YG++G+K W+ Sbjct: 150 GIRIRCAGRLGGADIARAEWYREGKVPLQTLRTPIDYGFAEARTLYGIIGVKCWV 204
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_XANP2 (30S ribosomal protein S3 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GI++ +GRL G EIAR EW REGRVPL T+ A +DY + T T YG G+K+W+F E Sbjct: 148 GIRINCSGRLGGAEIARLEWYREGRVPLHTLRADVDYGTATAFTTYGTCGVKVWVFKGE 206
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_SULDN (30S ribosomal protein S3 OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDE 178 GI+V ++GRL G E+AR EW EGRVPL T+ AKIDY T YG +G+K+WIF E Sbjct: 148 GIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRAKIDYGFAEAHTTYGCIGVKVWIFKGE 206
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RS3_RHOFD (30S ribosomal protein S3 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rpsC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.814e-12 Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIF 169 GI++ +GRL+G EIAR EW REGRVPL T+ A IDY + +T YG++G+K+W++ Sbjct: 148 GIKIMSSGRLNGIEIARCEWYREGRVPLHTLRADIDYGTSEAQTTYGIIGVKVWVY 203 The following BLAST results are available for this feature:
BLAST of CX069957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069957 ID=CX069957; Name=CX069957; organism=Citrus sinensis; type=EST; length=770bpback to top |