CX069957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_ORYSJ (30S ribosomal protein S3, chloroplastic OS=Oryza sativa subsp. japonica GN=rps3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 G++V+IAGRL GKEIARAE I++GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFVDE+ Sbjct: 180 GVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_ORYSI (30S ribosomal protein S3, chloroplastic OS=Oryza sativa subsp. indica GN=rps3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 G++V+IAGRL GKEIARAE I++GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFVDE+ Sbjct: 180 GVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_ORYSA (30S ribosomal protein S3, chloroplastic OS=Oryza sativa GN=rps3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 G++V+IAGRL GKEIARAE I++GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFVDE+ Sbjct: 180 GVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_ORYNI (30S ribosomal protein S3, chloroplastic OS=Oryza nivara GN=rps3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 G++V+IAGRL GKEIARAE I++GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFVDE+ Sbjct: 180 GVKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_MAIZE (30S ribosomal protein S3, chloroplastic OS=Zea mays GN=rps3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GI++QIAGRL GKEIARAE I++GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFV+E+ Sbjct: 165 GIKIQIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_HORVU (30S ribosomal protein S3, chloroplastic OS=Hordeum vulgare GN=rps3 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 46/60 (76.67%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 G++V+IAGRL GKEIARAE I+ GR+PLQTI AKIDYC Y +RTIYGVLG+KIWIFVDE+ Sbjct: 180 GVKVKIAGRLGGKEIARAESIKRGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_GINBI (30S ribosomal protein S3, chloroplastic OS=Ginkgo biloba GN=rps3 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20 Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GIQ+QIAGRLDG EIAR EW R GRVPLQTI A+ID+C Y +TIYGVLGIKIWIF DE+ Sbjct: 159 GIQIQIAGRLDGNEIARVEWARGGRVPLQTIRARIDHCYYPAKTIYGVLGIKIWIFGDEE 218
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_HUPLU (30S ribosomal protein S3, chloroplastic OS=Huperzia lucidula GN=rps3 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.877e-20 Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GI++QIAGRL+G EIAR EW REGRVPLQT+ A+IDYC Y +TIYGVLGIKIWIF DE+ Sbjct: 160 GIKIQIAGRLNGTEIARVEWAREGRVPLQTLRAQIDYCYYPAQTIYGVLGIKIWIFRDEE 219
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_PINTH (30S ribosomal protein S3, chloroplastic OS=Pinus thunbergii GN=rps3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.981e-20 Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWI 166 GIQ+QIAGRLDGKEIAR EW R GRVPLQTI A+IDYC Y V+TIYGVLGIKIWI Sbjct: 160 GIQIQIAGRLDGKEIARVEWDRGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214
BLAST of CX069957 vs. ExPASy Swiss-Prot
Match: RR3_MARPO (30S ribosomal protein S3, chloroplastic OS=Marchantia polymorpha GN=rps3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.981e-20 Identity = 44/60 (73.33%), Postives = 52/60 (86.67%), Query Frame = 2 Query: 2 GIQVQIAGRLDGKEIARAEWIREGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEK 181 GI++QIAGRL+G EIAR EW REGRVPLQTI A+I+YC Y +TIYGVLGIK+WIF DE+ Sbjct: 158 GIKIQIAGRLNGAEIARVEWAREGRVPLQTIRARINYCYYAAQTIYGVLGIKVWIFQDEE 217 The following BLAST results are available for this feature:
BLAST of CX069957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069957 ID=CX069957; Name=CX069957; organism=Citrus sinensis; type=EST; length=770bpback to top |