CX069956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_PHAAN (30S ribosomal protein S8, chloroplastic OS=Phaseolus angularis GN=rps8 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 6.027e-51 Identity = 102/136 (75.00%), Postives = 116/136 (85.29%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIA+IIT IRNADMN+KG V++ TNITE +VKILLREGF+EN RK +N K FLVLTLR+RRNRK + LNLKRIS PGLRIY+NY++IPRIL GMGIVILSTSRGIMTDR ARLE+IGGE+LCYIW Sbjct: 1 MGKDTIANIITYIRNADMNKKGMVQLPFTNITEKIVKILLREGFVENIRK--HRENNKYFLVLTLRYRRNRKESSKNFLNLKRISTPGLRIYYNYQQIPRILGGMGIVILSTSRGIMTDREARLEKIGGEVLCYIW 134
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_PELHO (30S ribosomal protein S8, chloroplastic OS=Pelargonium hortorum GN=rps8 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.343e-50 Identity = 99/136 (72.79%), Postives = 117/136 (86.03%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDT+++I+TSIRNADM +K TVRI TNI +N+V ILLREGFI+NAR+ ++KK FLVLTLRHRRNRKGP R + NLKR+SRPGLRIY NY++IPRIL GMG+ ILSTS+GIMTDR ARL+RIGGEIL YIW Sbjct: 1 MGKDTLSEIVTSIRNADMAKKETVRITFTNIAQNIVTILLREGFIKNARE--HRESKKSFLVLTLRHRRNRKGPSRTLFNLKRVSRPGLRIYSNYQKIPRILGGMGVAILSTSKGIMTDREARLKRIGGEILLYIW 134
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_SACHY (30S ribosomal protein S8, chloroplastic OS=Saccharum hybrid GN=rps8 PE=2 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 2.991e-50 Identity = 102/138 (73.91%), Postives = 116/138 (84.06%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRH--RRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIAD++TSIRNADMN+KGTVR+ STNITEN+VKILLREGFIE+ RK ++ + FLVLTLRH R+ RKG YR LKRISRPGLRIY NY+ IP++L GMGI ILSTSRGIMTDR ARL RIGGE+LCYIW Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRK--HQESNRYFLVLTLRHQRRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW 136
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_CUSRE (30S ribosomal protein S8, plastid OS=Cuscuta reflexa GN=rps8 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.991e-50 Identity = 101/136 (74.26%), Postives = 115/136 (84.56%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIA+IITSIRNADM+RK VRIAST+ITEN+VK+LLREGF EN RK +N K F VLTLRHRRN+K P R IL LKRISRPGLRIY+ ++IPRIL GMG++I+STSRGIMTDR ARLE IGGEIL YIW Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTHITENIVKLLLREGFFENVRK--HRENNKNFFVLTLRHRRNKKRPLRNILKLKRISRPGLRIYYKSQKIPRILGGMGVIIISTSRGIMTDREARLEGIGGEILFYIW 134
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_ACOCL (30S ribosomal protein S8, chloroplastic OS=Acorus calamus GN=rps8 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.991e-50 Identity = 106/135 (78.52%), Postives = 117/135 (86.67%), Query Frame = -2 Query: 73 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYI 477 MGKDTIADIITSIRNA M +KGTVRIASTN+TENVVKILLREGFIEN RK ++ K+FLVLTLRHRR RKG YR I LKRISRPGLRIY NY+ IP+IL G+GIVI+STSRGIMTDR ARL+ IGGE+LCYI Sbjct: 1 MGKDTIADIITSIRNAQMAKKGTVRIASTNLTENVVKILLREGFIENVRK--HRESNKDFLVLTLRHRRTRKGIYRTI--LKRISRPGLRIYSNYQGIPKILGGIGIVIVSTSRGIMTDREARLQGIGGEMLCYI 131
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_CUSEX (30S ribosomal protein S8, plastid OS=Cuscuta exaltata GN=rps8 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.102e-50 Identity = 102/136 (75.00%), Postives = 114/136 (83.82%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRHRRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MG+DTIA+IITSIRNADM+RK VRIAST+ITEN+VK+LLREGF EN RK +N K F VLTLRHRRN+K P R IL LKRISRPGLRIY+ +RIPRIL G G+VI+STSRGIMTDR ARLE IGGEIL YIW Sbjct: 1 MGRDTIAEIITSIRNADMDRKRVVRIASTHITENIVKLLLREGFFENVRK--HRENNKNFFVLTLRHRRNKKRPLRNILKLKRISRPGLRIYYKSQRIPRILGGRGVVIISTSRGIMTDREARLEGIGGEILFYIW 134
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_SORBI (30S ribosomal protein S8, chloroplastic OS=Sorghum bicolor GN=rps8 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.484e-49 Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRH--RRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIAD++TSIRNADMN+KGTVR+ STNITEN+VKILLREGFIE+ RK ++ + FLV TLRH R+ RKG YR LKRISRPGLRIY NY+ IP++L GMGI ILSTSRGIMTDR ARL RIGGE+LCYIW Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRK--HQESNRYFLVSTLRHQRRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW 136
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_SACOF (30S ribosomal protein S8, chloroplastic OS=Saccharum officinarum GN=rps8 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.484e-49 Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRH--RRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIAD++TSIRNADMN+KGTVR+ STNITEN+VKILLREGFIE+ RK ++ + FLV TLRH R+ RKG YR LKRISRPGLRIY NY+ IP++L GMGI ILSTSRGIMTDR ARL RIGGE+LCYIW Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRK--HQESNRYFLVSTLRHQRRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW 136
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_ORYSJ (30S ribosomal protein S8, chloroplastic OS=Oryza sativa subsp. japonica GN=rps8 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.484e-49 Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRH--RRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIAD++TSIRNADMN+KGTVR+ STNITEN+VKILLREGFIE+ RK ++ + FLV TLRH R+ RKG YR LKRISRPGLRIY NY+ IP++L GMGI ILSTSRGIMTDR ARL RIGGE+LCYIW Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRK--HQESNRYFLVSTLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW 136
BLAST of CX069956 vs. ExPASy Swiss-Prot
Match: RR8_ORYSI (30S ribosomal protein S8, chloroplastic OS=Oryza sativa subsp. indica GN=rps8 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.484e-49 Identity = 101/138 (73.19%), Postives = 115/138 (83.33%), Query Frame = -2 Query: 70 MGKDTIADIITSIRNADMNRKGTVRIASTNITENVVKILLREGFIENARKLVENKNKKEFLVLTLRH--RRNRKGPYRPILNLKRISRPGLRIYFNYRRIPRILDGMGIVILSTSRGIMTDRAARLERIGGEILCYIW 477 MGKDTIAD++TSIRNADMN+KGTVR+ STNITEN+VKILLREGFIE+ RK ++ + FLV TLRH R+ RKG YR LKRISRPGLRIY NY+ IP++L GMGI ILSTSRGIMTDR ARL RIGGE+LCYIW Sbjct: 1 MGKDTIADLLTSIRNADMNKKGTVRVVSTNITENIVKILLREGFIESVRK--HQESNRYFLVSTLRHQKRKTRKGIYRTRTFLKRISRPGLRIYANYQGIPKVLGGMGIAILSTSRGIMTDREARLNRIGGEVLCYIW 136 The following BLAST results are available for this feature:
BLAST of CX069956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069956 ID=CX069956; Name=CX069956; organism=Citrus sinensis; type=EST; length=793bpback to top |