CX069942

Overview
NameCX069942
Unique NameCX069942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.188e-14
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2
Query:    8 LVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVI 256
            ++G + + N  +S+V+  G  F+IPR L+HFQ NVGK  A  +  FN+QNPG+     TLF + PPIP  +LTK+LRV   V+
Sbjct:  108 ILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVV 190          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2
Query:    2 KVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIR 268
            +V+VG  T  N  FSKV+    +F++PR L HFQLNVG G A+F+ +F++Q+PG+      LF T P +P E+L K+  + +D +  I+
Sbjct:  130 EVMVGFTTAANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIK 218          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.858e-14
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 2
Query:    8 LVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVI 256
            ++G + + N  +S+V+  G  FLIPR L+HFQ NVGK  A+ +  FN+Q+P V     TLF + PPIP  +LTK+LRV   V+
Sbjct:  131 ILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRVEAGVV 213          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.366e-14
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 2
Query:    2 KVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVI 256
            +VL G V+T   F+SKVL  G  F++PR +IHFQ NVG   A  I  FN+Q PGV  + +TLF + P IP+ +L KS +V   +I
Sbjct:  134 RVLAGFVSTAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKII 218          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 2
Query:   11 VGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIR 268
            VG +TT N   +K +  G  F+ P+ L+HFQ N G  PAT I  FN+Q PG  +   TLF+ TPP+P+ +LTK+ ++    +  I+
Sbjct:  125 VGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIGTKEVQKIK 210          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 2
Query:    2 KVLVGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVI 256
            ++LVG V+T   ++SKV+  G  F IPR L+HFQ N G   A  + +FN+Q PGV  + T LF   P IP+ +L KS +V  ++I
Sbjct:  140 RMLVGFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEII 224          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 2
Query:    5 VLVGLVTTN-----NTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIR 268
            +LVG VT+N     N  F+K+L PG VF+ P+ LIHFQLN G  PA  I   ++QNPGV      +F +TPPI +++L K+  +  D ++ I+
Sbjct:  131 LLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQ 223          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 2
Query:   11 VGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIR 268
            VG +TT N   SK +  G VF+ PR L+HFQ N G+ PA  I  FN+Q PG      TLF  +PP+P+++L ++ +++ + +  I+
Sbjct:  135 VGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIK 220          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 2
Query:   11 VGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIR 268
            VG +TT N   SK +T G VF+ PR L+HFQ N GK PA  +  FN+Q PG      TLF  +P +P+++L ++ +++ + +  I+
Sbjct:  135 VGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIK 220          
BLAST of CX069942 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 2
Query:   11 VGLVTTNNTFFSKVLTPGMVFLIPRALIHFQLNVGKGPATFIPIFNTQNPGVSDSLTTLFDTTPPIPNELLTKSLRVSDDVINGIRKARA 280
            VG +TT N  ++K ++ G VF+ PR L+HFQ N G  PA  I  FN+Q PG      TLF  +P +P+ +LTK+ +V    +  I+   A
Sbjct:  128 VGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSRLA 217          
The following BLAST results are available for this feature:
BLAST of CX069942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OXO1_HORVU2.188e-1445.78Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GL12_ORYSJ2.858e-1441.57Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GER3_WHEAT2.858e-1445.78Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL38_ORYSJ6.366e-1447.06Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA1.852e-1340.70Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL37_ORYSJ1.852e-1343.53Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ3.160e-1343.01Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
NEC1_NICLS4.126e-1339.53Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
NEC1_NICPL7.039e-1339.53Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL52_ORYSJ7.039e-1340.00Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G10-M19-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069942 ID=CX069942; Name=CX069942; organism=Citrus sinensis; type=EST; length=831bp
AAAGGTGCTTGTTGGGTTAGTAACAACTAATAATACCTTTTTCTCAAAGG
TTTTGACTCCCGGGATGGTGTTCTTAATTCCCAGAGCACTGATTCACTTC
CAGCTAAATGTTGGAAAGGGGCCGGCCACCTTTATACCTATTTTCAATAC
TCAAAATCCTGGCGTTTCGGACTCACTCACTACTCTTTTTGATACAACAC
CCCCAATTCCCAATGAATTGCTGACCAAATCTCTTCGAGTAAGTGATGAT
GTGATAAATGGCATCAGAAAAGCCCGGGCATCAAACTAGTAATCGGTCCA
GCTAGGTTAACATCCTGGGTGCTTGATCAATATGCTTTAGTGTGCCAACA
TATATATACTAATAAATGCGATTTATTTTATGTTACAATTATTGAATAAA
GAGTAAAGTCCAGACGACCAATAATTATTGAATAAGGAAAGCGAGATTTT
TTTTTTCTCATTTCTTCTTCTTTTACTTTTGATTTTTCCATGGCATTATC
TATGCAATTTGTTGCTTCCATCGGCCTCGTTCATTGGTATTTCCTTGTAG
GCTTCAAATAATCTTTTATAATCCGAATTTCATTCCTGTATTTCCAGCCT
CTCAATATCCATTAATGGTACCCCTGCAATAATTATTGAATAAAAAATGC
CTAATACTTATTAATTTTTTTGTCTTGTTAATTTTTTTTCATGGGTCATT
CTATTTGATATATACCGCGATAAAATAATTCGATAAATATGTCAAAAATA
AAATTACCGGTGAAATAGAAAACATACTGAAATCAAACCCGTTCATTGCT
TTATTATTTTTTTGTTCTCCCTATTCAACCG
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