CX069941

Overview
NameCX069941
Unique NameCX069941
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length783
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20
Identity = 62/224 (27.68%), Postives = 120/224 (53.57%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVY-TWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI--AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++  SR CPL Y    ++ +L  + Y    ++P    +PL  + T+P +CLL G  + P +++   +    +FLS I   + E+  +G S+   WRNEQ  W+I  V++H +     ++K+L     +F  T+K   +E  +  ++  F + T    L+P  +L+ILN+  +V GV   I    G+W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  789 RWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFT-SIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQ-FWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTT---LLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 1007          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20
Identity = 59/223 (26.46%), Postives = 116/223 (52.02%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPS-RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++  SR CP+ YG + R+  L    Y   +++P+   +PL  + TLP +CL     + P++S+   +    +FLS     + E+  +G  +  W   ++ W+I  V++H +     I+K+L     +F  T+K  D E     E+  F + T    L+P  +L+I+N+  +V GV   I  G  +W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  806 RWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPIT-SIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASD-EDGDFAELYLFKWTT---LLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 1023          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20
Identity = 66/230 (28.70%), Postives = 122/230 (53.04%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++ +SR CP+ YG         R S + S+ Y   SL  L+YC       +LP +CLL G  + PE+S+   ++   +F+S A+   L+      G    WRNEQ  W+I  V+SH +     ++K+L     +F  T+K  D+ +        + F+ +S+ L+P  +L+I+N+  ++ GV   I  G  +W  LF ++  +L++++  +  ++G++ ++D+
Sbjct:  829 RWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYC-------SLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQ-FWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSEL----YIFKWTSL-LIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDR 1045          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20
Identity = 67/230 (29.13%), Postives = 124/230 (53.91%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++ +SR CP+ YG         R+S + S+ Y   SL  ++YC       +LP +CLL G  + PE+S+   ++   +F S AI   L+      G    WRNEQ  W+I  V++H +     ++K+L     +F  T+K  D+ +     +    F+ +S+ L+P ++L+I+NV  ++ GV   I+ G  +W  LF ++  +L+++I  +  ++G++ ++D+
Sbjct:  826 RWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYC-------SLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL----FKWTSL-LIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDR 1042          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20
Identity = 53/224 (23.66%), Postives = 115/224 (51.34%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG--PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++  SR  PL YG    ++  L    Y   +++P    +PL  +  LP +CLL    + P +S+   +    +F+S I   + E+  +G S+  W   ++ W+I  +++H +  +  ++K+L     +F  T+K  D++     + G+      +  L+P  +++I+N+  +V G+   I  G  +W  LF ++  S ++++  +  ++G++ R+++
Sbjct:  767 RWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFT-SIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-----DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNR 984          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20
Identity = 58/223 (26.01%), Postives = 113/223 (50.67%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++  S  CPL YG    +  L    Y    ++P    +PL  + TLP +CLL G  + PE+++   +    +F+      + E+  +G  +  W   ++ W+I  V+SH +     ++K++     SF  T+K  D+E+    E+  F + T    L+P  +L++LN   +V GV   I  G  +W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  834 RWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFT-SIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1050          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19
Identity = 59/223 (26.46%), Postives = 113/223 (50.67%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G I++  S  CPL YG    +  L    Y    ++P    +PL  + TLP +CLL G  + PE+++   +    +F+      + E+  +G  +  W   ++ W+I  V+SH +     ++K++     SF  T+K  D+E+    E+  F + T    L+P  +L++LN   +V GV   I  G  +W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  833 RWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWT-SIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1049          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19
Identity = 59/223 (26.46%), Postives = 113/223 (50.67%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G I++  S  CPL YG    +  L    Y    ++P    +PL  + TLP +CLL G  + PE+++   +    +F+      + E+  +G  +  W   ++ W+I  V+SH +     ++K++     SF  T+K  D+E+    E+  F + T    L+P  +L++LN   +V GV   I  G  +W  LF ++  + ++++  +  ++G++ R+++
Sbjct:  833 RWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWT-SIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1049          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19
Identity = 63/230 (27.39%), Postives = 123/230 (53.48%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G +++ +SR CP+ YG         R+S + S+ Y   S+  L+YC       +LP +CLL G  + PE+S+   ++   +F S A+   L+      G    WRNEQ  W+I  V++H +     ++K+L   + +F  T+K  D+ +        + F+ +S+ L+P  +L+I+NV  ++ G+   I+ G  +W  LF ++  + ++++  +  ++G++ ++D+
Sbjct:  811 RWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYC-------SLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSEL----YIFKWTSL-LIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDR 1027          
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19
Identity = 53/223 (23.77%), Postives = 114/223 (51.12%), Query Frame = -1
Query:  124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783
            RWA G I++ +SR CP+ YG   R+ LL  + Y    ++P+   +PL  +  LP  CL+    + PE+S+   +    +F+S     + E+  +G S+  W   ++ W+I   ++H +     ++K+L     +F  T+K  D +     +  +      +  L+P  +++++N+  +V GV   +  G  +W  LF ++  +L+++   +  ++G++ R+++
Sbjct:  821 RWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPIT-SIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDG----DFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNR 1038          
The following BLAST results are available for this feature:
BLAST of CX069941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CESA4_ARATH2.420e-2027.68Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA3_ARATH2.420e-2026.46Cellulose synthase A catalytic subunit 3 [UDP-form... [more]
CESA9_ARATH3.160e-2028.70Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA6_ARATH5.391e-2029.13Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA7_ARATH7.041e-2023.66Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA3_ORYSJ9.195e-2026.01Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA5_ORYSJ1.569e-1926.46Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.569e-1926.46Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ARATH3.494e-1927.39Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA1_ARATH3.494e-1923.77Cellulose synthase A catalytic subunit 1 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13G09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G09-M17-1-4.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069941 ID=CX069941; Name=CX069941; organism=Citrus sinensis; type=EST; length=783bp
TTTTTTTTTTTTTTGAAACTCTCTACACTTCGCTTAAAATTAAATAAGAA
TGATAGATCCAAAGAACAAGAAAGTCACAAAAAATAGGCTTGATAATAAA
ATGGCTGATGGCGAAATTCTTCCCTTGTCCTTTCTCACTATCATCCCTTC
AACAATTGCAAAATTGATGATCAAGATGTAGAGTGAGAGCAACACTTGCG
CAAACAACTTGTCCCAGTTGCCCACAGCAATCATTCTGATAACTCCGCAA
ACCAAGGCTGCCACGTTCAAAATCATCAAAGAAACCATAGGAACAAGAAA
CACAGAGGATGTTTGAAAATCAAATTGGCCCATTTCATATCTTTTGACTT
GTTCATTATCTAAAACCTTGTTGGTTGGCAAGAAACTGGCTTTCCTCAAG
CCAAGAAGTTTCATAATAGCATCCATACTTCCATAGAAATGAGATGTGAC
AGACTTTATCATCCAAATTCTCTGCTCATTTCTCCATGTATAGACTGAAC
CTCCAGTTGAAATGACCTCTTGCAAGTGTTTACAAATCGCCGATAAGAAA
ATGAATGAAAGTACCATAAAGAAAGGACTTGAAACCTCAGGGTACAGAGG
GATGCCGTTTAGCAGACACAACTGAGGAAGAGTAGCAAAACACCAGAGAG
GCAAGCAATAAAGAAGAGGGAACAACGACATCTCTCCATAGCACATGCTC
AGAAGTAAAGACATCCTTGACGGTCCGTAAAGTAGAGGGCAGAATCTCGA
GATACTGACGTCAATCAACCCAGAGGCCCATCT
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