CX069941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20 Identity = 62/224 (27.68%), Postives = 120/224 (53.57%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVY-TWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI--AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ SR CPL Y ++ +L + Y ++P +PL + T+P +CLL G + P +++ + +FLS I + E+ +G S+ WRNEQ W+I V++H + ++K+L +F T+K +E + ++ F + T L+P +L+ILN+ +V GV I G+W LF ++ + ++++ + ++G++ R+++ Sbjct: 789 RWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFT-SIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQ-FWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTT---LLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 1007
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.420e-20 Identity = 59/223 (26.46%), Postives = 116/223 (52.02%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYGPS-RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ SR CP+ YG + R+ L Y +++P+ +PL + TLP +CL + P++S+ + +FLS + E+ +G + W ++ W+I V++H + I+K+L +F T+K D E E+ F + T L+P +L+I+N+ +V GV I G +W LF ++ + ++++ + ++G++ R+++ Sbjct: 806 RWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPIT-SIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGILKVLAGIDTNFTVTSKASD-EDGDFAELYLFKWTT---LLIPPTTLLIVNLVGVVAGVSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNR 1023
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.160e-20 Identity = 66/230 (28.70%), Postives = 122/230 (53.04%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ +SR CP+ YG R S + S+ Y SL L+YC +LP +CLL G + PE+S+ ++ +F+S A+ L+ G WRNEQ W+I V+SH + ++K+L +F T+K D+ + + F+ +S+ L+P +L+I+N+ ++ GV I G +W LF ++ +L++++ + ++G++ ++D+ Sbjct: 829 RWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYC-------SLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQ-FWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSEL----YIFKWTSL-LIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDR 1045
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 5.391e-20 Identity = 67/230 (29.13%), Postives = 124/230 (53.91%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ +SR CP+ YG R+S + S+ Y SL ++YC +LP +CLL G + PE+S+ ++ +F S AI L+ G WRNEQ W+I V++H + ++K+L +F T+K D+ + + F+ +S+ L+P ++L+I+NV ++ GV I+ G +W LF ++ +L+++I + ++G++ ++D+ Sbjct: 826 RWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYC-------SLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILEMQWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVDTNFTVTSKAADDGEFSDLYL----FKWTSL-LIPPMTLLIINVIGVIVGVSDAISNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDR 1042
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.041e-20 Identity = 53/224 (23.66%), Postives = 115/224 (51.34%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG--PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ SR PL YG ++ L Y +++P +PL + LP +CLL + P +S+ + +F+S I + E+ +G S+ W ++ W+I +++H + + ++K+L +F T+K D++ + G+ + L+P +++I+N+ +V G+ I G +W LF ++ S ++++ + ++G++ R+++ Sbjct: 767 RWALGSVEIFFSRHSPLWYGYKGGKLKWLERFAYANTTIYPFT-SIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-----DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNR 984
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.195e-20 Identity = 58/223 (26.01%), Postives = 113/223 (50.67%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ S CPL YG + L Y ++P +PL + TLP +CLL G + PE+++ + +F+ + E+ +G + W ++ W+I V+SH + ++K++ SF T+K D+E+ E+ F + T L+P +L++LN +V GV I G +W LF ++ + ++++ + ++G++ R+++ Sbjct: 834 RWALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFT-SIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1050
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19 Identity = 59/223 (26.46%), Postives = 113/223 (50.67%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G I++ S CPL YG + L Y ++P +PL + TLP +CLL G + PE+++ + +F+ + E+ +G + W ++ W+I V+SH + ++K++ SF T+K D+E+ E+ F + T L+P +L++LN +V GV I G +W LF ++ + ++++ + ++G++ R+++ Sbjct: 833 RWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWT-SIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1049
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.569e-19 Identity = 59/223 (26.46%), Postives = 113/223 (50.67%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G I++ S CPL YG + L Y ++P +PL + TLP +CLL G + PE+++ + +F+ + E+ +G + W ++ W+I V+SH + ++K++ SF T+K D+E+ E+ F + T L+P +L++LN +V GV I G +W LF ++ + ++++ + ++G++ R+++ Sbjct: 833 RWALGSIEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPWT-SIPLLAYCTLPAICLLTGKFITPELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVIAGIDTSFTVTSKGGDDEEFS--ELYTFKWTT---LLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNR 1049
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19 Identity = 63/230 (27.39%), Postives = 123/230 (53.48%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYGPS-------RMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLS-AICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G +++ +SR CP+ YG R+S + S+ Y S+ L+YC +LP +CLL G + PE+S+ ++ +F S A+ L+ G WRNEQ W+I V++H + ++K+L + +F T+K D+ + + F+ +S+ L+P +L+I+NV ++ G+ I+ G +W LF ++ + ++++ + ++G++ ++D+ Sbjct: 811 RWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSIPLLVYC-------SLPAICLLTGKFIVPEISNYASILFMALFGSIAVTGILEMQWGKVGIDDWWRNEQ-FWVIGGVSAHLFALFQGLLKVLAGVETNFTVTSKAADDGEFSEL----YIFKWTSL-LIPPTTLLIINVIGVIVGISDAISNGYDSWGPLFGRLFFAFWVILHLYPFLKGLLGKQDR 1027
BLAST of CX069941 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19 Identity = 53/223 (23.77%), Postives = 114/223 (51.12%), Query Frame = -1 Query: 124 RWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 783 RWA G I++ +SR CP+ YG R+ LL + Y ++P+ +PL + LP CL+ + PE+S+ + +F+S + E+ +G S+ W ++ W+I ++H + ++K+L +F T+K D + + + + L+P +++++N+ +V GV + G +W LF ++ +L+++ + ++G++ R+++ Sbjct: 821 RWALGSIEILLSRHCPIWYGYHGRLRLLERIAYINTIVYPIT-SIPLIAYCILPAFCLITDRFIIPEISNYASIWFILLFISIAVTGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDG----DFAELYIFKWTALLIPPTTVLLVNLIGIVAGVSYAVNSGYQSWGPLFGKLFFALWVIAHLYPFLKGLLGRQNR 1038 The following BLAST results are available for this feature:
BLAST of CX069941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069941 ID=CX069941; Name=CX069941; organism=Citrus sinensis; type=EST; length=783bpback to top |