CX069940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.761e-21 Identity = 77/276 (27.90%), Postives = 134/276 (48.55%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFP------LLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTG-GSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI--AVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 808 Y SV+ED TG+ +H +GW S Y R F GT+ NL D L Q RWA+G +++ S+ +L R+ L M Y + ++P ++YCL LP L L +G + + F L I ++ + L EV +G G WRNEQ W+I ++H + ++K++ + SF T K + + + + +S+F +P ++++ +N+ ALV GV R + + + KL S ++L + +G++ R+ + Sbjct: 711 YGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVL-ASRRLKFLQRMAYLNVGIYPFTSLFLIMYCL-------LPALSLFSGQFIVATLDPTFLSYLLLITITLMLLCLLEVKWSGIGLEEWWRNEQ-FWVIGGTSAHLAAVLQGLLKVVAGIEISFTLTAKAAAEDDDDPF-AELYLIKWTSLF-IPPLAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGR 975
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.665e-19 Identity = 72/240 (30.00%), Postives = 111/240 (46.25%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMC--YGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD----NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAV 709 Y S++ED TG +H GW ST ++ P F+G + L Q RWASG +++ ISR P+L + SL C Y ++P+ L C+A L CLL+ P+ S F + +F++ E I G S N R+ I S ++ + I+K LG + F T K + E G+F F S+VF +P+ +L +L+V A+ G R++ V Sbjct: 453 YGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWASGFLEILISRNNPILTTTFK-SLQFRQCLAYLHSYVWPVRAPFEL-CYALLGPYCLLSNQSFLPKTSEDGFYIALALFIAYNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVF-IPVTALAMLSVIAIAVGAWRVVLV 689
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 4.845e-19 Identity = 69/243 (28.40%), Postives = 110/243 (45.27%), Query Frame = 2 Query: 2 FSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPL-----WCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD----NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMI 703 ++Y S++ED TG +H GW S L+ P FLG + T L Q RWA+GL ++ IS+ PLL +S+ + + + + LY + C+ L CLL + S F + +FL+ + E + G SV W N R+ I S ++ ++K +GL + F T K N Q + +F F S VF +P+ +L +LN+ A+ G R + Sbjct: 493 WAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWATGLFEILISQNNPLL-----LSIFKHLQFRQCLAYLTLYVWAVRGFVELCYELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVF-IPVTALTMLNIVAITIGTWRAV 729
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18 Identity = 62/270 (22.96%), Postives = 130/270 (48.15%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWD---KLFAQVLLSLYILIINFAIVEGMIVRKDK 808 Y +V+ED TG+ +H KGW S Y F+GT+ NL + L Q RW++G +++ SR P L+G + + L + Y ++ +P L L + T+P L + G + ++ F++ L+ + + + + EV G +V+ W + WM S +++ + + K++ R SF T+K+ ++ K + + + + + P++ +++ + + V + G W K+ V + ++L + +G++ + K Sbjct: 630 YGTVTEDVVTGYRMHIKGWRSRYCSIYPHAFIGTAPINLTERLFQVLRWSTGSLEIFFSRNNP-LFGSTFLHPLQRVAYINITTYPFT-ALFLIFYTTVPALSFVTGHFIVQRPTTMFYVYLAIVLGTLLILAVLEVKWAGVTVFEWFRNGQFWMTASCSAYLAAVLQVVTKVVFRRDISFKLTSKLPAGDEKKDPYADLYVVRWTWLMITPIIIILVNIIGSAV--AFAKVLDGEWTHWLKVAGGVFFNFWVLFHLYPFAKGILGKHGK 895
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.841e-18 Identity = 68/236 (28.81%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL----DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRM 700 Y S++ED TG +H GW S + P F+G++ L Q RWA+G ++ ISR P+L R+ + Y + +PL L C+ L C+L P+ S F V +F+S + E ++ G S W N R+ I SV++ + ++K LGL + F T K D++ + G+F F + VF +P+ +L +LN+ A+ G R+ Sbjct: 464 YGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVF-IPVTALAMLNIVAVTVGACRV 697
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.841e-18 Identity = 68/236 (28.81%), Postives = 110/236 (46.61%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL----DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRM 700 Y S++ED TG +H GW S + P F+G++ L Q RWA+G ++ ISR P+L R+ + Y + +PL L C+ L C+L P+ S F V +F+S + E ++ G S W N R+ I SV++ + ++K LGL + F T K D++ + G+F F + VF +P+ +L +LN+ A+ G R+ Sbjct: 464 YGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWATGQSEIIISRNNPILATMFKRLKFRQCLAYLIVLGWPLRAPFEL-CYGLLGPYCILTNQSFLPKASEDGFSVPLALFISYNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVF-IPVTALAMLNIVAVTVGACRV 697
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.472e-17 Identity = 75/288 (26.04%), Postives = 127/288 (44.10%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-------SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGN------WDKLFA--------QVLLSLYILIINFAIVEGMIVRKDK 808 Y +V+ED TGF +H +GW S Y + F GT+ NL D L Q RWA+G +++ SR LL G R + L + Y SLF + YCL F +P + G P + F+ + L+A+ + E +G ++ W ++ WM+ + +++ +K+ ++ SF T+K L + + D Q + ++ V +LM AAL V M A G WD A V ++++++ + G++ R+ K Sbjct: 523 YGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWAAGSLEIFFSRNNALLAGGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCL----FPAIPLIAGGGGWNAAPTPTYVAFLAALMVTLAAVA--VLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSAT---PVAGKDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAALPVAFNVWVVVHLYPFALGLMGRRSK 801
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.552e-16 Identity = 75/278 (26.98%), Postives = 129/278 (46.40%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPF-----FMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMK-LLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDK-----LFAQVLLSLYILIINFAIVEGMIVRKDK 808 Y +ED TGF LH KGW S Y F GT+ NL + L Q RW+ G +++ SR CPLL G R+ + + Y M+ +P + L + + LP + L + + + PF ++V + I L E+ G ++ W ++ +MI + + + ++K LLGL+ F T K L +R+ +D S + L P V +M +NV A+ + + VG W A ++ ++++L++ + G++ R K Sbjct: 559 YDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSRNCPLLAG-CRLRPMQRVAYANMTAYP-VSALFMVVYDLLPVIWLSHHGEFH--IQKPFSTYVAYLVAVIAMIEVI--GLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERF-AELYDVHWSPL-LAPTVVVMAVNVTAIGAAAGKAV-VGGWTPAQVAGASAGLVFNVWVLVLLYPFALGIMGRWSK 827
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.543e-15 Identity = 61/272 (22.43%), Postives = 126/272 (46.32%), Query Frame = 2 Query: 8 YQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKL-----FAQVLLSLYILIINFAIVEGMIVRKDK 808 Y +ED TGF LH GW S Y F GT+ NL + L Q RW+ G +++ S CPLL G R++ + + Y M+ +P+ L+ + P + + GI + + + L + + + E+ G ++ W ++ ++I + + + ++K GL+ SF T K + + +++ +D Q + + L P + ++ +N+ A+ + + + G W + ++ +++IL++ + G++ R K Sbjct: 571 YNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWSGGSLEMFFSHNCPLLAG-RRLNFMQRIAYINMTGYPVTSVFLLF-YLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKF-AELYDVQWAPL-LFPTIVVIAVNICAIGAAIGKAL-FGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSK 837
BLAST of CX069940 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.593e-14 Identity = 62/270 (22.96%), Postives = 122/270 (45.19%), Query Frame = 2 Query: 35 TGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVLSFIFLSAICKHLQ-EVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMK-LLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILN---VAALVCGVIRMIAVG-------NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK 808 TGF +H +GW+S Y P+RP F + + DVL +R A + + +SR ++ R+ LL + Y + +PL LPL + LP +CLL G +P S + VL + L ++ + E+ + + W ++++WM+ + ++ I+ G+ A T + G+ + +S + +L++ V A + GV+ +A G +W L A++ L+ +++ + G++ +D+ Sbjct: 551 TGFRMHARGWSSAYCSPARPAFRRYARASPADVLAGASRRAVAAMGILLSRRHSPVWAGRRLGLLQRLGYVARASYPLA-SLPLTVYCALPAVCLLTGKSTFPSDVSYYDGVLLILLLFSVAASVALELRWSRVPLRAWWRDEKLWMVTATSASLAAVFQGILSACTGIDVAFSTETAASPPKRPAAGNDDGEEEAALASEITMRWTNLLVAPTSVVVANLAGVVAAVAYGVDHGYYQSWGALGAKLALAGWVVAHLQGFLRGLLAPRDR 819 The following BLAST results are available for this feature:
BLAST of CX069940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069940 ID=CX069940; Name=CX069940; organism=Citrus sinensis; type=EST; length=811bpback to top |