CX069927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.278e-74 Identity = 140/188 (74.47%), Postives = 154/188 (81.91%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT++LQIWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P ++I PV Q C Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.587e-74 Identity = 139/188 (73.94%), Postives = 154/188 (81.91%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT++LQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM A R P ++I PV C Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.245e-73 Identity = 137/188 (72.87%), Postives = 155/188 (82.45%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT++LQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL+EIDRYA ENVNKLLVGNK DLT K+VVS + AK FA+ +GI F+ETSAK++ NVE+AFM M A IK RMA+ P A + P N + CC Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVKLTPGQQVPSNGGSKCC 201
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 274.248 bits (700), Expect = 6.177e-73 Identity = 138/189 (73.02%), Postives = 155/189 (82.01%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQP-AMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT E +GKTV+LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQ+SFNNVKQWL EIDRYA E VN+LLVGNK D+ DKKVV Y AK FAD + IPF+ETSAKDS NVEQAF+ M+ IK RM + A +NA+ +G V+Q +S C Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNC 202
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 272.707 bits (696), Expect = 1.797e-72 Identity = 134/189 (70.90%), Postives = 155/189 (82.01%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM-ASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD+Y +S+ISTIGVDFKIRT+E +GKT++LQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ +F NV+QWL EIDR+A ENVNKLLVGNK DL KKVV + TAKAFAD + IPF+ETSAK S NVEQAFM M +IKNR+ ASQP + V P++ K+ CC Sbjct: 14 IGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDKNKVVPGSSAPISPKSGCC 202
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 4.427e-71 Identity = 134/188 (71.28%), Postives = 151/188 (80.32%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRFADD Y +SYISTIGVDFKI+T+E DGKT++LQIWDTAGQERF TITSSYYRGAHG ++VYDVTDQES+ NVKQWL EIDR+ASENVNKLLVGNK DLT KKVV TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK +M A R P ++I PV C Sbjct: 14 IGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGER-PNLKIDSTPVKPAGGGC 200
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 2.274e-67 Identity = 125/190 (65.79%), Postives = 147/190 (77.37%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG---QPVNQKASC 844 IGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+ DGK ++LQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD SFNNVKQW+ EI RYA ++V +LLVGNKCDL +KK+V TA+ +AD +GIPF+ETSAK S NVEQAFM M ++IK NN+ +K P+ +K C Sbjct: 14 IGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKKLQGGIQPNNNSTYNAHVVKPTGFTPIGKKKKC 203
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 255.373 bits (651), Expect = 2.969e-67 Identity = 130/193 (67.36%), Postives = 147/193 (76.17%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPP----TVQIKGQPV-NQKASCC 844 IG+SGVGKSCLLLRF+DD+Y + YISTIGVDFKI+TVE DGKTV+LQIWDTAGQERFRTITSSYYRG+HGIIIVYDVTDQESFN VK WL EIDRYA+ V KLLVGNKCDL DK+VV Y+ AK FAD +PF+ETSA DS NVE AF+ M IK M+ Q + V +KGQ + N CC Sbjct: 14 IGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNVNLKGQSLTNTGGGCC 206
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.474e-66 Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = -2 Query: 308 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQ 844 IGDSGVGKSCLLLRFADDS+ D++ISTIGVDFKI+T+ DGKT++LQIWDTAGQERFRTITSSYYRGA GII+VYD TDQ+SF NVKQW+ EIDRYA ENVNKLLVGNK DL ++KVV AK+FA+ GIPF+ETSAK++ NVE+ F++M DIKNR+A +P V IK + Sbjct: 16 IGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLAD--IQETPKPDEVDIKSK 192
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.876e-62 Identity = 112/191 (58.64%), Postives = 152/191 (79.58%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQ---IKGQPVNQKASCC 844 IGDSGVGKSCLLLRF++DS+ S+I+TIG+DFKIRT+E +GK ++LQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF N++ W+ I+++A+++VNK+L+GNKCD+ +KKVV K+ ADE GI F+ETSAK+S+NVE+AF+++ DIK RM P N +P VQ G N+K +CC Sbjct: 21 IGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTP---NEQPQVVQPGTNLGANNNKKKACC 208 The following BLAST results are available for this feature:
BLAST of CX069927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069927 ID=CX069927; Name=CX069927; organism=Citrus sinensis; type=EST; length=845bpback to top |