CX069927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.207e-54 Identity = 99/188 (52.66%), Postives = 137/188 (72.87%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCC 844 IGDSGVGKSCLLLRF +D + S+I+TIG+DFKIRT++ + V+LQ+WDTAGQERFRTIT++YYRGA GI++VYDVTD++SFNN++ W + YA+E V +LVGNKCDL +K+VVS E +A AD+ GIPF+E S+K ++NVE+ F ++ I++ +A N + + I N + CC Sbjct: 17 IGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKG-NESGSGGINIAEGEENSASKCC 203
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.765e-54 Identity = 102/203 (50.25%), Postives = 142/203 (69.95%), Query Frame = -2 Query: 236 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCST*SFVLSFIACICL 844 IGDSGVGK+C L RF++D++ ++ISTIG+DFKIRT+E DGK ++LQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF N++ W+ I+ +AS +V K+++GNKCD DK+ VS E + A GI FMETSAK ++N+E AF + DIK +M + N+ + +K P QK S SF C+ L Sbjct: 14 IGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKKS---------SFFRCVLL 207
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.765e-54 Identity = 97/177 (54.80%), Postives = 135/177 (76.27%), Query Frame = -2 Query: 314 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 844 IGDSGVGK+CL++RFA+D++ ++YISTIG+DF+IRTV+ +GK ++LQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A A E GI F ETSAK SMNV++AF ++ DI + + NN +PP+ +K Sbjct: 14 IGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.387e-54 Identity = 97/177 (54.80%), Postives = 135/177 (76.27%), Query Frame = -2 Query: 314 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIK 844 IGDSGVGK+CL++RFA+D++ ++YISTIG+DFKIRTV+ +GK ++LQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A A E GI F ETSAK SMNV++AF ++ DI + + + N +PP+ +K Sbjct: 14 IGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.095e-53 Identity = 95/180 (52.78%), Postives = 139/180 (77.22%), Query Frame = -2 Query: 305 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQP 844 IGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRTVE DGK ++LQIWDTAGQERFRTIT++YYRGA GI+ VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ +K+ VS E + A + GI F+ETSAK S+NVE+AF+ + DI ++ + N+ + ++K P Sbjct: 14 IGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKLKSPP 193
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.095e-53 Identity = 102/203 (50.25%), Postives = 145/203 (71.43%), Query Frame = -2 Query: 236 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASCCST*SFVLSFIACICL 844 IGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK ++LQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNK D+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + +K P QK S SF C+ L Sbjct: 14 IGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKITPDQQKRS---------SFFRCVLL 207
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.868e-53 Identity = 98/187 (52.41%), Postives = 137/187 (73.26%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQKASC 844 IGDSGVGK+CL++RFA+D++ ++YISTIG+DFKIRTVE +GK ++LQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ K+ V E A A E GI F ETSAK SMNV++AF ++ DI + + + N+++P + +K C Sbjct: 14 IGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLKPSDKKNTNKC 200
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53 Identity = 92/160 (57.50%), Postives = 130/160 (81.25%), Query Frame = -2 Query: 365 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRM 844 IGDSGVGK+CLL RF++D++ ++ISTIG+DFKIRT+E DGK ++LQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N+K W+ I+ +AS +V ++++GNKCD+ DK+ VS E + A + GI F+E SAK SMNVE+AF + DI ++ Sbjct: 14 IGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKL 173
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53 Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -2 Query: 293 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK 844 IGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK ++LQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + + +K QK Sbjct: 14 IGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 2.440e-53 Identity = 97/184 (52.72%), Postives = 140/184 (76.09%), Query Frame = -2 Query: 293 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK 844 IGDSGVGK+C+L RF++D++ ++ISTIG+DFKIRT+E DGK ++LQIWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W+ I+ +AS +V K+++GNKCD+ DK+ VS E + A + GI FMETSAK ++NVE AF + DIK +M + N+ + + +K QK Sbjct: 14 IGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197 The following BLAST results are available for this feature:
BLAST of CX069927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069927 ID=CX069927; Name=CX069927; organism=Citrus sinensis; type=EST; length=845bpback to top |