CX069927

Overview
NameCX069927
Unique NameCX069927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RASM_HUMAN (Ras-related protein M-Ras OS=Homo sapiens GN=MRAS PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.035e-19
Identity = 60/162 (37.04%), Postives = 90/162 (55.56%), Query Frame = -2
Query:  365 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKD-SMNVEQAFMAMTADIKNRM 844
            +GD GVGKS L ++F    ++  Y  TI  D  ++  E D +   L + DTAGQE F  +   Y R   G +IVY VTD+ SF +V ++   I R    E+   +LV NK DL   + ++ E  K  A +  IP++ETSAKD  +NV++AF  +   I+ ++
Sbjct:   19 VGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQI 179          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RRAS2_MOUSE (Ras-related protein R-Ras2 OS=Mus musculus GN=Rras2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = -2
Query:  374 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIK 844
            +G  GVGKS L ++F    ++  Y  TI   +  + V  D +  RL I DTAGQE F  +   Y R   G ++V+ VTD+ SF  + ++  +I R    +    +L+GNK DL  ++ V+ E  +  A ++ + +ME SAK  MNV+QAF  +   I+
Sbjct:   20 VGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDD-RAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIR 176          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RRAS2_HUMAN (Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = -2
Query:  374 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIK 844
            +G  GVGKS L ++F    ++  Y  TI   +  + V  D +  RL I DTAGQE F  +   Y R   G ++V+ VTD+ SF  + ++  +I R    +    +L+GNK DL  ++ V+ E  +  A ++ + +ME SAK  MNV+QAF  +   I+
Sbjct:   20 VGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDD-RAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIR 176          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 52/160 (32.50%), Postives = 89/160 (55.62%), Query Frame = -2
Query:  368 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNR 844
            +GD GVGK+ + ++F  + ++  Y  TI   ++ + V  D +   L I DTAGQ+    +   + R   G ++VY VT + SF+ +  +  +I+R   S++V  +++GNK DL D++ V+Y+  K  A   G+ FME SAK   N+E+ F      +K +
Sbjct:   15 MGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCVIDD-QVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVFNETVRCVKRK 173          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAPC_DICDI (Ras-related protein rapC OS=Dictyostelium discoideum GN=rapC PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 52/174 (29.89%), Postives = 95/174 (54.60%), Query Frame = -2
Query:  335 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQES---FNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGI-PFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR 844
            +G SG GK+ L +RF +  ++++Y  TI   ++       G+ + L+I DT+G ER+  +   Y R A   ++VY +T + S     N+K ++ ++       +  +++GNKCDL D +VV  E  +A   + GI  F+ETSAK  MN++ A+  +T  + ++ +     +N +
Sbjct:    9 LGASGTGKTSLTVRFVNGDFVETYDPTIEDLYRKVIETNKGEHIMLEIMDTSGTERYLAMRDLYIRNAQAFVLVYSITSRVSLLELENIKNYICQVKDRPISQIPMVVLGNKCDLEDTRVVFPEEVEALTKKWGIEDFLETSAKIDMNIQSAYDCLTLQLMSKQSFLNGSSNGK 182          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = -2
Query:  374 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIK 844
            +G  GVGKS L ++F    ++  Y  TI  D   +    DG   RL I DTAGQE F  +   Y R  HG ++V+ + D++SFN V +   +I R    ++   +LVGNK DL  ++ V    A AF     + + E SAK  +NV++AF  +   ++
Sbjct:   35 VGGGGVGKSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVR 191          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RP1BL_HUMAN (Ras-related protein Rap-1b-like protein OS=Homo sapiens PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = -2
Query:  368 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADE-IGIPFMETSAKDSMNVEQAFMAMTADIKNR 844
            +G  GVGKS L ++F    +++ Y  TI   ++   VE D +   L+I DTAG E+F  +   Y +   G  +VY +T Q +FN+++    +I R   +++V  +LVGNKCDL D++VV  E  +  A +     F+E+SAK  +NV + F  +   I  +
Sbjct:    9 LGSRGVGKSALTVQFVQGIFVEKYDPTIEDSYR-EQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRK 168          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RASN_DANRE (GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = -2
Query:  371 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKN 844
            +G  GVGKS L ++   + ++D Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF +V  +  +I R   S++V  +LVGN CDL   + V  + A+  A   GI F+ETSAK    VE AF  +  +I++
Sbjct:    9 VGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADVHLYREQIKRVKDSDDVPMVLVGNICDLA--RTVDTKQAQELARSYGIEFVETSAKTRQGVEDAFYTLVREIRH 164          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RASM_RAT (Ras-related protein M-Ras OS=Rattus norvegicus GN=Mras PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = -2
Query:  311 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKD-SMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG 844
            +GD GVGKS L ++F    ++  Y  TI  D  ++  E D +   L + DTAGQE F  +   Y R   G +IVY VTD+ SF +V ++   I R    E+   +LV NK DL   + V+ +  K  A +  IP++ETSAKD  +NV++ F  +   I+ ++   P  N  +    + +G
Sbjct:   19 VGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQV---PEKNQKKKKKTKWRG 194          
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RASM_MOUSE (Ras-related protein M-Ras OS=Mus musculus GN=Mras PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 62/180 (34.44%), Postives = 95/180 (52.78%), Query Frame = -2
Query:  311 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKD-SMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKG 844
            +GD GVGKS L ++F    ++  Y  TI  D  ++  E D +   L + DTAGQE F  +   Y R   G +IVY VTD+ SF +V ++   I R    E+   +LV NK DL   + V+ +  K  A +  IP++ETSAKD  +NV++ F  +   I+ ++   P  N  +    + +G
Sbjct:   19 VGDGGVGKSALTIQFFQKIFVPDYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQV---PEKNQKKKKKTKWRG 194          
The following BLAST results are available for this feature:
BLAST of CX069927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASM_HUMAN1.035e-1937.04Ras-related protein M-Ras OS=Homo sapiens GN=MRAS ... [more]
RRAS2_MOUSE1.352e-1934.81Ras-related protein R-Ras2 OS=Mus musculus GN=Rras... [more]
RRAS2_HUMAN1.352e-1934.81Ras-related protein R-Ras2 OS=Homo sapiens GN=RRAS... [more]
RASX_DICDI1.352e-1932.50Ras-like protein rasX OS=Dictyostelium discoideum ... [more]
RAPC_DICDI1.352e-1929.89Ras-related protein rapC OS=Dictyostelium discoide... [more]
RRAS_HUMAN1.765e-1934.81Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
RP1BL_HUMAN1.765e-1934.16Ras-related protein Rap-1b-like protein OS=Homo sa... [more]
RASN_DANRE1.765e-1935.85GTPase NRas OS=Danio rerio GN=nras PE=2 SV=1[more]
RASM_RAT2.305e-1934.44Ras-related protein M-Ras OS=Rattus norvegicus GN=... [more]
RASM_MOUSE2.305e-1934.44Ras-related protein M-Ras OS=Mus musculus GN=Mras ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_13G01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-13G01-M1-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069927 ID=CX069927; Name=CX069927; organism=Citrus sinensis; type=EST; length=845bp
GGGCGAAATTGGGTACCGCGGCCCCCCCTTTTTTTTAAAGAAAAAGAACA
ATTTAATAACATTTGCCACTATCAAGCAACACATCATTTGTACATGCCAT
ATAATAGTAATATAGACTGAAAGAATTGAAATTTCACAATAACTTACAAA
AACTAGTAAAGCAATCCGTCATATGATTCATGGGGTAGGAATAGTTTTTC
ACTGGTTCCTACAACGTGATTGAGAAAGCTACCCATAAACAAATGCACGC
AATGAAGGATAAGACAAACGATTAAGTTGAGCAGCAGCTGGCCTTCTGGT
TCACCGGTTGTCCTTTTATCTGCACAGTTGGTGGCCTTGCATTGTTCATT
GCAGGTTGACTTGCCATCCTGTTCTTAATGTCAGCAGTCATAGCCATAAA
AGCTTGTTCCACGTTCATAGAATCCTTTGCGCTGGTCTCCATGAACGGGA
TGCCAATTTCATCAGCAAATGCCTTCGCTGTTTCATAAGAGACAACCTTC
TTATCAGTGAGATCACACTTGTTTCCAACCAGAAGCTTGTTTACATTTTC
ACTTGCATAGCGATCAATTTCATTCAACCACTGCTTAACGTTGTTGAAGC
TCTCTTGGTCTGTAACATCATAAACAATGATAATGCCATGTGCTCCACGG
TAGTAGCTGCTAGTGATTGTCCTGAATCGTTCTTGCCCTGCAGTGTCCCA
AATTTGGAGTCTTACAGTCTTCCCGTCTTGCTCCACTGTGCGAATTTTAA
AGTCAACCCCAATAGTGCTAATGTAACTGTCCAGGTACGAATCATCAGCA
AATCTCAGAAGAAGACACGATTTGCCAACTCCAGAGTCTCCAATC
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