CX069927
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 9.931e-47 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 844 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG V+LQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T ++VV E + A E G+PFMETSAK +NV+ AF A+ ++K R P+ R V+ +G+ V SCC Sbjct: 70 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPSEPRFRLHDYVKREGRGV----SCC 255
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.297e-46 Identity = 84/159 (52.83%), Postives = 117/159 (73.58%), Query Frame = -2 Query: 368 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNR 844 +GDSGVGKSCLLLRF +D + S+I+TIG+DFKIRT+E GK ++LQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD SF NV+ W + ++A+E+ LVGNKCD + VS E + A ++ +PF+E SAK + NV+ F + + I+ + Sbjct: 20 VGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.297e-46 Identity = 90/192 (46.88%), Postives = 134/192 (69.79%), Query Frame = -2 Query: 278 IGDSGVGKSCLLLRFADDSYLD-SYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK--ASCCS 844 +GDSGVGK+C L++F D ++L ++I+T+G+D + + V DG V+LQIWDTAGQERFR++T +YYR A ++++YD+T+Q SF+N++ WL EI YA +V +L+GNK D++ ++V+ E + A E G+PFMETSAK MNVE AF+A+ ++K R QP P+ QI+ +QK +SCCS Sbjct: 35 LGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQP-----DEPSFQIRDYVESQKKRSSCCS 221
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.694e-46 Identity = 87/191 (45.55%), Postives = 137/191 (71.73%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 844 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K ++LQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ D++V+S E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 36 IGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 186.422 bits (472), Expect = 1.694e-46 Identity = 87/191 (45.55%), Postives = 137/191 (71.73%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 844 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K ++LQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ D++V+S E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 36 IGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.694e-46 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = -2 Query: 281 IGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNAR-PPTVQIKGQPVNQKASCC 844 +GDSGVGK+CLL+RF D ++L ++IST+G+DF+ + ++ DG V+LQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI YA ++V +L+GNK D T +VV E + A E G+PFMETSA+ +NV+ AF A+ ++K R A P+ R V+ +G+ V SCC Sbjct: 73 VGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPSEPRFRLHDYVKREGRGV----SCC 258
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.212e-46 Identity = 89/196 (45.41%), Postives = 134/196 (68.37%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQ---------PVNQKASC 844 IG+S VGK+ L R+ DDS+ +++ST+G+DFK++TV + K V+LQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W +I Y+ EN +LVGNKCD+ ++VVS + + AD++G+ F ETSAK+++NV+ F + I ++MA + + P Q KGQ P Q+ +C Sbjct: 28 IGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAE----SLDKDPQQQPKGQKLEANPTQKPAQQQCNC 219
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.212e-46 Identity = 87/191 (45.55%), Postives = 136/191 (71.20%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 844 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K ++LQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 36 IGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.212e-46 Identity = 87/191 (45.55%), Postives = 136/191 (71.20%), Query Frame = -2 Query: 284 IGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMA----SQPAMNNARPPTVQIKGQPVNQKASC 844 IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV ++ K ++LQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ D++VVS E + +++G F ETSAKD++NV+Q F + I ++M+ + PA+ A+ T ++K P + +C Sbjct: 36 IGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CX069927 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 184.882 bits (468), Expect = 4.929e-46 Identity = 88/192 (45.83%), Postives = 135/192 (70.31%), Query Frame = -2 Query: 278 IGDSGVGKSCLLLRFADDSYLD-SYISTIGVDFKIRTVEQDGKTVRLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSMNVEQAFMAMTADIKNRMASQPAMNNARPPTVQIKGQPVNQK--ASCCS 844 +GD+GVGK+C L++F D ++L ++I+T+G+DF+ + V DG V+LQIWDTAGQERFR++T +YYR A ++++YD+T++ SF+N++ WL EI YA +V +L+GNK D++ ++V+ E + A E G+PF+ETSAK MNVE AF+A+ ++K R Q A P+ QI+ +QK +SCCS Sbjct: 35 LGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ-----ADEPSFQIRDYVESQKKRSSCCS 221 The following BLAST results are available for this feature:
BLAST of CX069927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069927 ID=CX069927; Name=CX069927; organism=Citrus sinensis; type=EST; length=845bpback to top |