CX069926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: R51A2_MAIZE (DNA repair protein RAD51 homolog B OS=Zea mays GN=RAD51B PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.143e-28 Identity = 74/111 (66.67%), Postives = 79/111 (71.17%), Query Frame = -3 Query: 12 KASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 344 +ASGIAALDVKKLKDAGLCTVESVAYSPRK+LLQIKGISEAKVDKIIE AASKLVPLGFTSA+QLHAQRLEIIQ+T+GSR Sbjct: 30 QASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIKGISEAKVDKIIE--------------------------------AASKLVPLGFTSASQLHAQRLEIIQLTTGSR 108
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_SOLLC (DNA repair protein RAD51 homolog OS=Solanum lycopersicum GN=RAD51 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.950e-28 Identity = 74/111 (66.67%), Postives = 78/111 (70.27%), Query Frame = -3 Query: 12 KASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 344 +ASGIAALDVKKLKDAGLCTVESV Y+PRKELLQIKGISEAKVDKIIE AASKLVPLGFTSA+QLHAQRLEIIQITSGS+ Sbjct: 32 QASGIAALDVKKLKDAGLCTVESVVYAPRKELLQIKGISEAKVDKIIE--------------------------------AASKLVPLGFTSASQLHAQRLEIIQITSGSK 110
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_ARATH (DNA repair protein RAD51 homolog 1 OS=Arabidopsis thaliana GN=RAD51 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.935e-26 Identity = 67/111 (60.36%), Postives = 77/111 (69.37%), Query Frame = -3 Query: 12 KASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 344 +A+GIA++DVKKL+DAGLCTVE VAY+PRK+LLQIKGIS+AKVDKI+E AASKLVPLGFTSA+QLHAQR EIIQITSGSR Sbjct: 32 QAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVE--------------------------------AASKLVPLGFTSASQLHAQRQEIIQITSGSR 110
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: R51A1_MAIZE (DNA repair protein RAD51 homolog A OS=Zea mays GN=RAD51A PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.183e-25 Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = -3 Query: 12 KASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 344 +ASGIAALDVKKLKD+GL TVE+VAY+PRK+LLQIKGISEAK DKIIE AASK+VPLGFTSA+QLHAQRLEIIQ+T+GSR Sbjct: 30 QASGIAALDVKKLKDSGLHTVEAVAYTPRKDLLQIKGISEAKADKIIE--------------------------------AASKIVPLGFTSASQLHAQRLEIIQVTTGSR 108
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_HUMAN (DNA repair protein RAD51 homolog 1 OS=Homo sapiens GN=RAD51 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.884e-17 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL--------------------------------AEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_CANFA (DNA repair protein RAD51 homolog 1 OS=Canis familiaris GN=RAD51 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.884e-17 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISIKGISEAKADKIL--------------------------------TEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_BOVIN (DNA repair protein RAD51 homolog 1 OS=Bos taurus GN=RAD51 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.884e-17 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL--------------------------------TEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_MOUSE (DNA repair protein RAD51 homolog 1 OS=Mus musculus GN=Rad51 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17 Identity = 52/114 (45.61%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG TVE+VAY+P+KEL+ IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINIKGISEAKADKIL--------------------------------TEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_CHICK (DNA repair protein RAD51 homolog 1 OS=Gallus gallus GN=RAD51A PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG TVESVA++P+KELL IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKIL--------------------------------AEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107
BLAST of CX069926 vs. ExPASy Swiss-Prot
Match: RAD51_RABIT (DNA repair protein RAD51 homolog 1 OS=Oryctolagus cuniculus GN=RAD51 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.920e-16 Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 12 ARHKASGIAALDVKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGXXXXXXXXXXXXXXXSCQCFCERASYVFFMAASKLVPLGFTSATQLHAQRLEIIQITSGSR 353 +R + GI A DVKKL++AG T E+VAY+P+KEL+ IKGISEAK DKI+ A+KLVP+GFT+AT+ H +R EIIQIT+GS+ Sbjct: 26 SRLEQCGINANDVKKLEEAGFHTEEAVAYAPKKELINIKGISEAKADKIL--------------------------------TEAAKLVPMGFTTATEFHQRRSEIIQITTGSK 107 The following BLAST results are available for this feature:
BLAST of CX069926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069926 ID=CX069926; Name=CX069926; organism=Citrus sinensis; type=EST; length=811bpback to top |